Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0151 ATGCATAGTGCAGATATAATGCATGCTGCGAGGGTTTGCAATATAGAAAGCGAGGCTTTTAATATGAGCAGCCAAGGACCAAGTGAAGGCCAAGGGGCAGATGGGAGAGGTTTTCAAAGTTGGCGAATGGTGGTTTTAGACTTGGACCTCAACTTACCTCATCCTGAGGAGAGCTTGGATGCAGCAGCTCAAGGACTGGCACTTGATAATGAAAATTTGCCATTGCAGACTGCAGTTGATTCTGAGCTTAATGATGTTATTATAATCTCCCCAAGGAAATTTGAAGAAGCAAAGAACAATTCTCGAAGAAAAAATGCTTGCCGAAACTATGGGGTTATACAAGTGCTTGATGAAGATAGACGAAACATTTCAGAATCGACAGCAGAGGCAGTCTACCATGTGGGAAACAATAGACCTCCACAAGACCAAGCAATTGTGGACTGTGAGCTAAGACTAGGTGTGGAAGACAGTATGAAAGCCAAGAAAACTGATGTTCTTCCACCTCTCATGCAGTCTCCAAGTGAGGTCCTGCCTGAGACACCCACCTTCAGTTGCACAATTTGCATGGGCCAGCTGATTGAAGAGACATCAACTAAGTGTGGCCATATTTTCTGCAAAAAGTGCATTCAGGCAGCTATAGCAGCTCAACACAAATGTCCGACCTGCCGGCGTAAACTTAGGAAGTCTGACATGTTTAGGGTCTATCTTCCAACAGCTAACTAG 723 0.4454 MHSADIMHAARVCNIESEAFNMSSQGPSEGQGADGRGFQSWRMVVLDLDLNLPHPEESLDAAAQGLALDNENLPLQTAVDSELNDVIIISPRKFEEAKNNSRRKNACRNYGVIQVLDEDRRNISESTAEAVYHVGNNRPPQDQAIVDCELRLGVEDSMKAKKTDVLPPLMQSPSEVLPETPTFSCTICMGQLIEETSTKCGHIFCKKCIQAAIAAQHKCPTCRRKLRKSDMFRVYLPTAN 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0151 240 SUPERFAMILY RING/U-box 184 228 - -
Bisa08g0151 240 ProSiteProfiles Zinc finger RING-type profile. 185 223 IPR001841 -
Bisa08g0151 240 SMART ring_2 185 222 IPR001841 -
Bisa08g0151 240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 238 IPR013083 -
Bisa08g0151 240 ProSitePatterns Zinc finger RING-type signature. 200 209 IPR017907 -
Bisa08g0151 240 PANTHER ELFLESS, ISOFORM B 38 239 - -
Bisa08g0151 240 Pfam Zinc finger, C3HC4 type (RING finger) 185 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0151 Bisa-ChrBisa08 1966277 1969480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0151 42 238 C3H Transcription Factor Family AT5G48655 35.468 2.17e-24 94.7