Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0123 ATGACGAAGAATAAATTCAAATTCTTACTGCTAAACAATTGTCTGTCTCGTTCTCATGTTGCTCAACAAAATCATTGGTTTTGCAATGAAAAAGTCAGATTCCATCATGTAATGTTTTACACTGTGCAATATATTACAGGTATATCAATCTCGTCCTTCATTTCTCATCCCTCTGCTGTGTTTCTTCATTCGTGTATTGATGATACCCTCGGGGTTCCGTTTTCGCATTTCGCTTTGATTTCTGTTTTAAAGAAGCTATTTACATCCGTTAGTCATCATAGATCAGGTTTTGCTTCTCCTATAGTATATTTGAGGGTGACTTCTGTTCTTTGGGCGAGGAAATTTAAGGGAAATGAGGCACGCGGGTACGGGGTATTTGTTTCTCCAGGAGGGGTTGACAAATGGTGCTTGGTTCTATATTTGGCTGCAAACTCTGCAGCTGAAAGTGCAGGTCCTGTCTCTTCTGCCAACAATGCTGGAACTGGTAATACTTCAGCTCCGTCTCGCCCCACTTATGTTCCTCCACCTCTTAGGAACCGTCTGCCCTCTTCAGAATCTCCTGCTCCAGCATATAGTGGCTCTACTTCTGGCCCTGGTACTGGGAGTAGTACTAATAATGCTGGACCAGGTTGGGCCATGCCCAGAAATGATAATCGTTCAGGGTATGGTGGCAGTAGCCATGGTAGTGGATGGGGAAACAGGGGCATTGGTTGGGACCGTGGCAAGGAGCGAGAAGCCAATCCCTTTGCCAACATGGATGATGCAGAAGAGGTTCTTAGTGAGCAGGAGAATACTGGAATTAATTTTGATGCATATGAAGACATTCCTGTGGAGACCAGTGGTGGCAATGTGCCTCTGCCCGTGAATACATTTGCAGAGATTGACTTGGGTGAAGCACTTAATCAGAATATAAGAAGGTGCAAATATGTCAAGCCAACGCCTGTTCAGCGACATGCCATACCAATATCCCTTGCCGGACGGGATTTGATGGCTTGCGCACAGACTGGTTCTGGAAAGACAGCTGCTTTTTGTTTCCCAATTATCAGTGGAATTATGAGGGGCGAGCCTGTACAGAGGCCACCTCGTGGGGTGCGTACAGTATATCCACTTGCTCTTGTTCTCTCACCAACTAGGGAGCTGTCAATGCAAATACATGAAGAAGCGAGGAAATTTTCATACCAAACAGGGGTTAGGGTGGTTGTTGCTTATGGTGGTGCACCAATAAACCAGCAGCTGCGAGATCTTGAGAGAGGAGTTGATATTCTTGTTGCAACTCCTGGAAGACTGGTGGATTTGCTGGAGAGGGCTAGAGTTTCACTGCAGATGATAAGATATTTGGCCTTGGATGAGGCAGATCGGATGCTGGATATGGGCTTTGAGCCTCAAATAAGGAAGATTGTAGAACAGATGGACATGCCTCCACCATGTGCCAGACAGACTATGCTGTTCAGTGCAACTTTTCCGAAAGAGATACAGAGATTGGCCGCTGATTTCCTTTCAAATTATGTTTTTCTGGCTGTCGGAAGAGTGGGATCAAGTACAGATTTGATTGTCCAAAGAGTTGAATATGTTCAGGAGTCAGACAAGAGAAGTCACCTCATGGACCTTCTTCATGCGCAGAGGGCAAATGGTGTACAAGGAAAGCAAGCGTTGACATTAGTTTTTGTTGAGACAAAGAAGGGAGCTGATTCACTGGAACACTGGCTGTGTATGAATGGTTTTCCAGCTACCACTATTCACGGGGACAGGACACAACAGGAAAGAGAAATGGCATTAAGGTCATTTAAAAGTGGCAACACCCCCATATTGGTCGCCACTGATGTGGCTGCTCGTGGTCTTGATATTCCTCATGTTGCCCACGTGGTCAACTTTGATTTGCCAAATGATATTGATGATTATGTACACCGTATTGGAAGGACAGGCCGAGCAGGGAAGAAAGGTCTGGCCACTGCATTCTTTAATGACAACAATGCGTCAATAGCAAGGGCTCTAGCAGATCTGATGCAAGAAGCAAATCAAGAAGTGCCTGCTTGGCTATCACGGTATGCTGCTCGATCTTCTTTTGGAGGAAGGAACCGTCGATCAGGCGGAGGCCGGTTTGGTGGTCGTGACTTCCGAAGAGACAGCTATAACAGTAGGGGTGGTTCTGATTATTACAGTGCAGGAAATAGCAGTGGTGGGTATGGCGCTTCTGGTGGGTATGCTGGAGGATACCCCAGTGCGTGGGACTGA 2232 0.4619 MTKNKFKFLLLNNCLSRSHVAQQNHWFCNEKVRFHHVMFYTVQYITGISISSFISHPSAVFLHSCIDDTLGVPFSHFALISVLKKLFTSVSHHRSGFASPIVYLRVTSVLWARKFKGNEARGYGVFVSPGGVDKWCLVLYLAANSAAESAGPVSSANNAGTGNTSAPSRPTYVPPPLRNRLPSSESPAPAYSGSTSGPGTGSSTNNAGPGWAMPRNDNRSGYGGSSHGSGWGNRGIGWDRGKEREANPFANMDDAEEVLSEQENTGINFDAYEDIPVETSGGNVPLPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGEPVQRPPRGVRTVYPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPCARQTMLFSATFPKEIQRLAADFLSNYVFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREMALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNASIARALADLMQEANQEVPAWLSRYAARSSFGGRNRRSGGGRFGGRDFRRDSYNSRGGSDYYSAGNSSGGYGASGGYAGGYPSAWD 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0123 743 MobiDBLite consensus disorder prediction 697 711 - -
Bisa08g0123 743 Gene3D - 508 687 IPR027417 -
Bisa08g0123 743 MobiDBLite consensus disorder prediction 713 727 - -
Bisa08g0123 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 662 IPR027417 -
Bisa08g0123 743 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 289 317 IPR014014 GO:0003724
Bisa08g0123 743 MobiDBLite consensus disorder prediction 150 240 - -
Bisa08g0123 743 FunFam Probable ATP-dependent RNA helicase DDX4 252 507 - -
Bisa08g0123 743 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 258 683 - -
Bisa08g0123 743 MobiDBLite consensus disorder prediction 693 743 - -
Bisa08g0123 743 Gene3D - 246 507 IPR027417 -
Bisa08g0123 743 MobiDBLite consensus disorder prediction 185 211 - -
Bisa08g0123 743 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 320 505 IPR014001 -
Bisa08g0123 743 CDD DEADc_DDX3_DDX4 290 511 IPR044763 GO:0003724|GO:0005524
Bisa08g0123 743 Pfam Helicase conserved C-terminal domain 529 644 IPR001650 -
Bisa08g0123 743 CDD SF2_C_DEAD 517 653 - -
Bisa08g0123 743 SMART helicmild6 563 644 IPR001650 -
Bisa08g0123 743 Pfam DEAD/DEAH box helicase 313 494 IPR011545 GO:0003676|GO:0005524
Bisa08g0123 743 FunFam ATP-dependent RNA helicase RhlB 508 687 - -
Bisa08g0123 743 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 516 683 IPR001650 -
Bisa08g0123 743 SMART ultradead3 308 520 IPR014001 -
Bisa08g0123 743 MobiDBLite consensus disorder prediction 150 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0123 Bisa-ChrBisa08 1626329 1633167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0123 287 676 Eukaryotic Initiation Factors Gene Family AT3G19760 31.726 1.18e-61 211