Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0102 ATGAGAGGCAGGAGTTATACCCCATCACCACCCAGGGGTTATGGTAGAAGAGGAAGAAGTCCTAGCCCTAGGGGCCGTTATGGTGGTCGTGGCAGAGATCTTCCTACAAGCCTTCTAGTTCGCAACCTTCGCCATGACTGTAGGCCTGAGGATCTTCGTAGACTGTTTGGGCAATTTGGTGCTGTAAAGGACATTTACCTTCCAAAGGATTATTACACTGGAGAACCTCGTGGCTTTGGTTTTGTCCAATTCGTAGATCCTGCTGATGCTGCAGATGCTAAGTATCATGTGGATGGTCAAATTCTTCTTGGTCGAGAGTTGACTGTTGTTTTTGCTGAGGAGAACAGAAAGAAGCCCACAGAGATGAGGGCAAGAGAACGAAGGGGGCGATTTTCTGATCGAAGGAGGTCTCCTCCTCGATACTCTCGTTCACCACCACCACCACCACATCATAGATCTCGGTCTCGTGATTATTATTCCCCTCCTCCCAAACGAAAGGAATATTCAAGATCTGTTTCACCTGAAGATAGAAGATACAGTCGAGAAAGAGAAAGATCTTATCCGCGGCAGAGTCGGGAGAGATCATACTCACGCTCTCCACCCTATAATGGTGGCTCAAGGAGCCGGAGTCAGAGTCCAGCAAGGGGACCAAGCAAGAGCCGAAGTCGGAGTCCAAATCGTGATGATTATCCAAGGGAACCATCTCGCGGTCGGTCCCCCAGCCAATGA 729 0.4952 MRGRSYTPSPPRGYGRRGRSPSPRGRYGGRGRDLPTSLLVRNLRHDCRPEDLRRLFGQFGAVKDIYLPKDYYTGEPRGFGFVQFVDPADAADAKYHVDGQILLGRELTVVFAEENRKKPTEMRARERRGRFSDRRRSPPRYSRSPPPPPHHRSRSRDYYSPPPKRKEYSRSVSPEDRRYSRERERSYPRQSRERSYSRSPPYNGGSRSRSQSPARGPSKSRSRSPNRDDYPREPSRGRSPSQ 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0102 242 MobiDBLite consensus disorder prediction 193 220 - -
Bisa08g0102 242 MobiDBLite consensus disorder prediction 117 140 - -
Bisa08g0102 242 MobiDBLite consensus disorder prediction 150 192 - -
Bisa08g0102 242 MobiDBLite consensus disorder prediction 1 33 - -
Bisa08g0102 242 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 35 225 - -
Bisa08g0102 242 MobiDBLite consensus disorder prediction 117 242 - -
Bisa08g0102 242 SUPERFAMILY RNA-binding domain, RBD 36 141 IPR035979 GO:0003676
Bisa08g0102 242 SMART rrm1_1 37 110 IPR000504 GO:0003723
Bisa08g0102 242 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 107 IPR000504 GO:0003723
Bisa08g0102 242 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Bisa08g0102 242 MobiDBLite consensus disorder prediction 221 235 - -
Bisa08g0102 242 Gene3D - 31 143 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0102 Bisa-ChrBisa08 1341388 1344458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0102 3 99 Eukaryotic Initiation Factors Gene Family AT3G11400 39.623 3.87e-10 57.0