Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0088 ATGAGGAATCCAGCTGCATCGTCATCGGCGTCAAGAGGTGGAACTGGAAGCAGTGGTAACAACAAGACGACGCCGTGCTGTATCAAGGTAGGGCTGAAGAGAGGGCCTTGGACTCCGGAGGAGGACCAGCTTCTGGCCAAGTACATCGAAAAAGAAGGCGAAGGCCGGTGGCGCACCCTCCCCAAGCGAGCAGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATGAACTACCTCCGCCCCTCCGTCAAGCGCGGCCACATCGCCCCCGACGAGGAGGACCTTATCCTCCGCCTCCACCGCCTCCTCGGCAACCGGTGGTCTCTGATAGCAGGAAGGATTCCAGGAAGAACGGATAATGAGATAAAGAATTACTGGAACACACATCTGAGCAAGAAGCTCATCGGGCAAGGCATTGATCCTCGTACTCACAAGCCTCTCAAGCTCAGCCCTAACCCTAATCCTAGTCCTTCTCTAAATCCAATCACCAATAAGGAGGAATCTGACCTTCCTTTGAATCCCTATCTTCTTCCTGCTCCGCAATCTGATCAATTGGATCCATATCAATCATCTTCTGCTGCACAAGGATTAGATAACTGTGGAGGCTATGGGGATCTAACAGTAACTCCTGCTGCAACAGATTCCCACGCCTCTGCAATTCCTTTCGCTAGTGATGACAACAAGAATAAGAACAACAACAACAATGATGTGCTCCCCAGCGAAGAAGTGGAGGATGATATCAATTACTGTTCCGACGATGTCTTCAGTTCTTTCCTCAATTCCTTGATCAACGACGACGCCTTTTCTGCTCAACATCAACAACAGCAGCAGCAGCAGCAGCAGGCTCCCAATGGAATCACTGGCGTCGGTGTTGCCTGGGAATCGGCACTCGTGTCGTCTTCTTCCTCCTTCTCCCACAGCAACCCCAATCCTATGCTTGATCATCATGTCCCCTAG 963 0.5254 MRNPAASSSASRGGTGSSGNNKTTPCCIKVGLKRGPWTPEEDQLLAKYIEKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGHIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLIGQGIDPRTHKPLKLSPNPNPSPSLNPITNKEESDLPLNPYLLPAPQSDQLDPYQSSSAAQGLDNCGGYGDLTVTPAATDSHASAIPFASDDNKNKNNNNNDVLPSEEVEDDINYCSDDVFSSFLNSLINDDAFSAQHQQQQQQQQQAPNGITGVGVAWESALVSSSSSFSHSNPNPMLDHHVP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0088 320 SUPERFAMILY Homeodomain-like 31 128 IPR009057 -
Bisa08g0088 320 CDD SANT 36 81 IPR001005 -
Bisa08g0088 320 Gene3D - 91 154 - -
Bisa08g0088 320 SMART sant 33 83 IPR001005 -
Bisa08g0088 320 SMART sant 86 134 IPR001005 -
Bisa08g0088 320 MobiDBLite consensus disorder prediction 221 242 - -
Bisa08g0088 320 FunFam transcription repressor MYB5-like 91 157 - -
Bisa08g0088 320 ProSiteProfiles Myb-like domain profile. 82 132 IPR001005 -
Bisa08g0088 320 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 24 273 - -
Bisa08g0088 320 MobiDBLite consensus disorder prediction 140 195 - -
Bisa08g0088 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 136 IPR017930 -
Bisa08g0088 320 ProSiteProfiles Myb-like domain profile. 29 81 IPR001005 -
Bisa08g0088 320 MobiDBLite consensus disorder prediction 222 240 - -
Bisa08g0088 320 FunFam Myb transcription factor 31 87 - -
Bisa08g0088 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 81 IPR017930 -
Bisa08g0088 320 Pfam Myb-like DNA-binding domain 92 132 IPR001005 -
Bisa08g0088 320 Pfam Myb-like DNA-binding domain 34 81 IPR001005 -
Bisa08g0088 320 CDD SANT 92 132 IPR001005 -
Bisa08g0088 320 MobiDBLite consensus disorder prediction 1 25 - -
Bisa08g0088 320 Gene3D - 31 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0088 Bisa-ChrBisa08 1080132 1081227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0088 22 308 MYB Transcription Factor Family AT3G13540 53.103 7.45e-89 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa08g0088 Myb_DNA-binding 2e-15 CL0123