Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0080 ATGCCTAGGGATGTGTCCATTCGGGTGATGGGTTCTCTTGCGACAAGGAAAATGGCAACTTTAGTTGAGCCACCGAATAAAATTAGGCCAAAGGGGAAGCATTATTACTCCATATGGCAAACATTGTTTGAGATTGATACAAAGTACGTTCCCATAAAACCCATTGGCCGAGGAGCATATGGCGTAGTGTGTTCTTCCATCAACAGGGAAACCAATGAGAAAGTTGCGATTAAGAAGATTGGTAATATATTTGATAATCGCATTGATGCCTTGAGAACACTAAGGGAGTTAAAGCTGCTAAGACATATTAGGCACGAGAATGTGATCGCCTTGAAGGATGTTATGTTGCCTGTCCATAGAACAAGTTTTAAGGATGTTTACTTGGTTTATGAGCTCATGGATACAGATCTCCATCACATTATAAAGTCCTCACAGCCCCTTTCCAATGATCATTGCAAATATTTTATATTTCAGCTGCTTCGAGGTCTTAAATATCTTCATTCTGCAAATATCCTTCATCGTGACTTGAAGCCTGGAAATCTGCTCATCAATGCCAATTGTGATTTGAAGATATGTGATTTTGGGCTTGCACGGACCAATGGAGGTGATGGCCAGTTCATGACAGAGTATGTCGTCACTCGCTGGTATCGTGCTCCAGAGCTCCTTTTGTGCTGTGAAAATTATGGAACCTCTATTGATGTGTGGTCCGTAGGATGCATTTTTGCTGAGATTCTTGGTAGAAAACCAATCTTTCCTGGAACTGAATGCCTCAACCAGTTGAAACTAATTATACGTGTTCTTGGAAGCCAGTATGAGGCTGATCTTGCGTTTATTGATAATCCAAAGGCAAGGAGGTACATCAAATCACTGCCCTATACAAGGGGCATACACTTGTCTCAGCTGTATCCACAAGCAGATCCATTAGCCATAGATTTATTGCAAAAAATGCTTGTGTTTGATCCGACCAAGAGAATTACTATCATAGAAGCACTCCAACACCCATATATGGCGGGTCTGTATGATCCAAGGTCTAATCCTCCGGCCCAGGTTCCGATCAATCTTGACATAGATGAAAATTGGGGAGAACAGATGATTAGGGAAATGATGTGGAATGAAACGCTTCATTATCATCCTGAAGCTTCTACCAATGCGTAG 1155 0.4165 MPRDVSIRVMGSLATRKMATLVEPPNKIRPKGKHYYSIWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFDNRIDALRTLRELKLLRHIRHENVIALKDVMLPVHRTSFKDVYLVYELMDTDLHHIIKSSQPLSNDHCKYFIFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNGGDGQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIRVLGSQYEADLAFIDNPKARRYIKSLPYTRGIHLSQLYPQADPLAIDLLQKMLVFDPTKRITIIEALQHPYMAGLYDPRSNPPAQVPINLDIDENWGEQMIREMMWNETLHYHPEASTNA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0080 384 SMART serkin_6 49 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0080 384 FunFam Mitogen-activated protein kinase 35 142 - -
Bisa08g0080 384 Pfam Protein kinase domain 50 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0080 384 Gene3D Transferase(Phosphotransferase) domain 1 133 362 - -
Bisa08g0080 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bisa08g0080 384 ProSitePatterns Protein kinases ATP-binding region signature. 55 79 IPR017441 GO:0005524
Bisa08g0080 384 ProSitePatterns MAP kinase signature. 84 187 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bisa08g0080 384 Gene3D Phosphorylase Kinase; domain 1 36 372 - -
Bisa08g0080 384 CDD STKc_TEY_MAPK 43 378 - -
Bisa08g0080 384 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 48 347 - -
Bisa08g0080 384 SUPERFAMILY Protein kinase-like (PK-like) 41 342 IPR011009 -
Bisa08g0080 384 ProSiteProfiles Protein kinase domain profile. 49 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0080 384 FunFam Mitogen-activated protein kinase 133 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0080 Bisa-ChrBisa08 995362 998150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0080 18 380 MAP Kinase Gene Family AT2G18170 85.675 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Bisa08g0080 Pkinase 1.4e-69 CL0016