Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0053 ATGTATAGTTCAACCAGAAGGTGGGCCAGAAGCCTCGGGTGTTCAAAGAATGGAAGGCAGGTCGGTGAAAAAGCTCAAGTTGACATGACACCAAATCTCAATTCCAAATTTGTTGAGAACAAGCAGACACAAAACAAGTTTCGTTTTTGTGATGGCTTGCCTGTAAGGGAGAGGCTGCCAGGTTCTATATATCTCCTCTTGCTTCTAATGGGCAACTGCTGCTTTTCTAGGGAATCCTCAGTTCACAGAGTCTCATCCAATGCAAAGTCAGATTCATCAAGAGACCAAAACCATGGAATGAAAGCGCGGCATGATGACAGTAAGTTACCATCCAATCCCGAAGAAGTAGAGGTCCTTCGCCGTGATTCAGCTGCAAATCCTTTGATTGTCTTCGCATTTGATGAACTAAAGGTAATCACTGGGAATTTTAGGCAAGATCGTCTGTTGGGCGGAGGAGGATTTGGAAGTGTTTATAAGGGGTTTCTGTCAGAGGACGTAAGAGAAGGGCTATCTTCTGTTTCTGTAGCTGTTAAGGTTCATGATGGTGACAACAGTCATCAAGGGCACAGAGAATGGCTGGCGGAAGTCATATTTCTGGGGCAGCTTTCTCATCCAAATTTGGTCAAATTAATTGGATATTGCTGCGAAGATGAACATAGGATGCTAATATATGAGTACATGGCCCGTGGCAGTGTGGAAAACAATCTCTTCTCCAGAGTATTGCTTCCGTTGCCGTGGTCCATAAGAATGAAAATTGCATTTGGTGCTGCAAAAGGACTTGCATTTCTTCATGAAGCAGAGAAGCCTGTCATCTATCGTGACTTCAAGACATCAAATATTTTACTGGACCTGGACTACAACGCAAAACTGTCTGACTTTGGGCTTGCTAAAGATGGACCTGTTGGAGACAAATCTCATGTGTCTACTCGCATAATGGGAACTTACGGGTATGCTGCACCTGAATACATATTGACAGGTCATCTGACACCAAGAAGTGATGTGTACAGTTTCGGGGTTGTTCTTCTGGAGCTTCTGACAGGAAGAAAATCTCTGGATAAGTCGCGACCCGCTCGGGAGCAGAACCTCACAGATTGGGCACTTCCTTTGCTCAAGGAAAAGAAGAAACTGCTCAATATAATTGATCCAAGGCTGGAAGGCGATTATCCTGTTAAAGGCGTTCACAAGGCCGCCATGCTCGCTTACCATTGCTTGAACCGCAATCCTAAAGCCAGGCCTCTCATGCGAGATATTGTTGATTCTTTGGAGCCTTTGCAGCTTCACAATGACCTTCCCCTGCCTACAACATTGACCATCATCACTGAAGTTCCTCACCAAGAATTTAAAAATAAAGCTGCAGAGTAG 1362 0.4464 MYSSTRRWARSLGCSKNGRQVGEKAQVDMTPNLNSKFVENKQTQNKFRFCDGLPVRERLPGSIYLLLLLMGNCCFSRESSVHRVSSNAKSDSSRDQNHGMKARHDDSKLPSNPEEVEVLRRDSAANPLIVFAFDELKVITGNFRQDRLLGGGGFGSVYKGFLSEDVREGLSSVSVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDEHRMLIYEYMARGSVENNLFSRVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYILTGHLTPRSDVYSFGVVLLELLTGRKSLDKSRPAREQNLTDWALPLLKEKKKLLNIIDPRLEGDYPVKGVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQLHNDLPLPTTLTIITEVPHQEFKNKAAE 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0053 453 PANTHER OS01G0588500 PROTEIN-RELATED 97 425 - -
Bisa08g0053 453 FunFam Serine/threonine-protein kinase BIK1 110 226 - -
Bisa08g0053 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Bisa08g0053 453 Gene3D Phosphorylase Kinase; domain 1 105 226 - -
Bisa08g0053 453 ProSitePatterns Protein kinases ATP-binding region signature. 149 178 IPR017441 GO:0005524
Bisa08g0053 453 Pfam Protein tyrosine and serine/threonine kinase 145 421 IPR001245 GO:0004672|GO:0006468
Bisa08g0053 453 Gene3D Transferase(Phosphotransferase) domain 1 227 431 - -
Bisa08g0053 453 MobiDBLite consensus disorder prediction 85 115 - -
Bisa08g0053 453 MobiDBLite consensus disorder prediction 94 115 - -
Bisa08g0053 453 SUPERFAMILY Protein kinase-like (PK-like) 127 434 IPR011009 -
Bisa08g0053 453 FunFam Probable serine/threonine-protein kinase PBL8 227 438 - -
Bisa08g0053 453 ProSiteProfiles Protein kinase domain profile. 143 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0053 Bisa-ChrBisa08 744613 749620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0053 90 421 Glycoside Hydrolase AT3G07070 49.123 6.65e-107 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa08g0053 PK_Tyr_Ser-Thr 1.8e-45 CL0016