Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3405 ATGATCCTGGAAGGACTAAGGAGTCACCCACCTGCATATTTTGTGTTGCCACATGCAGTTTTAGAGGATGTGATGTTGAATAGTTACTTGGTGCCTAAGGAAGGGACTATGAATTTCATGGTGGCAGAGATGGAAGACTCCAATTGGATTGGCTACCAGCGCCCGAGGATCCTCCCGATCCCGAAGAAGATGAATGTCTGGCTCACAATCCCACCACTGTCGCCGGCGGCAAGATACCAACTTATCTGCAATTCAAGAGTCAATTGCATCAGTTGGGTTGACAAAACTCTGGTTGGAGCTCTTTCCGGTGTTCTCTCCTTTGGACTCTTGATCTCTTCGCCGTCGGCCATTGCGCTTGAAACACCTACCCTTCGAACCCCGATTTCTCCTACTCCTCCTGCAGAAAGTTGTCATGATGTCGAGGAAGAAGAGAGGGCTGATACGAGTCCAGAGGTGTTGACTAATGAGGGAATTGTCGAGGAAGCTTGGCAGATTGTCAATGATAGCTTTCTGGATACTGGGCGCCGTCGCTGGTCTCAGGAGAGCTGGCAGCAAAAGAGGGAAGACGTTTTGAGCAATTCCATTCAGACAAGATCAAAGGCTCACCAGATAATCAAGCGAATGCTGGCCAGTTTGGGTGATCCTTATACGCGGTTTCTTTCCCCCGAAGAGTTCTCCAAGATGGCGAGGTATGACATGACTGGTATTGGAATAAACCTTAGGGAAGTTCCAGATGAAAATGGAGGCGTCAGAATGAAGGTGCTAGGAATTATACTGGATGGCCCTGCTCATTCTGCTGGTGTGAGACAGGGGGATGAAGTATTAGCTGTCAACGGAGTTGAGGTTCAGGGAAAATCAGCTTTTGAAGTTTCATCTTTGTTGCAAGGCCCTAATGAAACACTTGTGACTGTTCAGGTCAAGCATGGCAACTGCGGACCTGTTGAATCAATAGAAGTACAGAGGCAACTTGTAGCTCGAACACCAGTTTTTTATCGGCTGGAACAAGCAGATGGTGGTGCCACTCCTGTTGGGTACATACATCTGAAAGAGTTCAATGCATTAGCCAGGAAAGATTTGGTTATCGCAATGAAGCGACTTCAAGGCATGGGTGCCTCATATTTCATTTTGGATCTTAGAGATAATCTTGGTGGGCTAGTACAGGCTGGAATTGAAATTGCCAAGCTCTTCCTAGGTGAAGGGGACACGGTCATCTACACTGTTGGTAGAGATTCCCAGTTTCAAAAGGCTATTGTTGCTGATACTTCACCATTGGTTCAAGCTCCTGTTATTGTTTTAGTGAATGATAAAACTGCCAGTGCAAGTGAAATAGTTGCTTCTGCACTGCATGATAATTGTAGAGCTGTTCTTGTTGGACAACGCACATATGGCAAGGGTTTGATTCAATCTGTATTTGAGCTGCGTGATGGATCCGGCGTGGTTGTCACAGTTGGCAAGTATGTAACACCAGATCACAAAGATATAAATGGCAATGGAATAGAGCCTGATTTCCGTAACCTTCCAGCGTGGAGCGATGTCAGCCAACGTCTTTCAAAATGCACTATGCTTCGGCAAGGATGA 1578 0.4651 MILEGLRSHPPAYFVLPHAVLEDVMLNSYLVPKEGTMNFMVAEMEDSNWIGYQRPRILPIPKKMNVWLTIPPLSPAARYQLICNSRVNCISWVDKTLVGALSGVLSFGLLISSPSAIALETPTLRTPISPTPPAESCHDVEEEERADTSPEVLTNEGIVEEAWQIVNDSFLDTGRRRWSQESWQQKREDVLSNSIQTRSKAHQIIKRMLASLGDPYTRFLSPEEFSKMARYDMTGIGINLREVPDENGGVRMKVLGIILDGPAHSAGVRQGDEVLAVNGVEVQGKSAFEVSSLLQGPNETLVTVQVKHGNCGPVESIEVQRQLVARTPVFYRLEQADGGATPVGYIHLKEFNALARKDLVIAMKRLQGMGASYFILDLRDNLGGLVQAGIEIAKLFLGEGDTVIYTVGRDSQFQKAIVADTSPLVQAPVIVLVNDKTASASEIVASALHDNCRAVLVGQRTYGKGLIQSVFELRDGSGVVVTVGKYVTPDHKDINGNGIEPDFRNLPAWSDVSQRLSKCTMLRQG 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3405 525 NCBIfam C-terminal processing peptidase 188 503 IPR004447 GO:0006508|GO:0008236
Bisa07g3405 525 Pfam Peptidase family S41 343 503 IPR005151 GO:0006508|GO:0008236
Bisa07g3405 525 ProSiteProfiles PDZ domain profile. 225 309 IPR001478 GO:0005515
Bisa07g3405 525 SUPERFAMILY PDZ domain-like 208 324 IPR036034 GO:0005515
Bisa07g3405 525 SUPERFAMILY ClpP/crotonase 158 504 IPR029045 -
Bisa07g3405 525 Pfam PDZ domain 256 307 IPR041489 -
Bisa07g3405 525 Gene3D - 234 326 IPR036034 GO:0005515
Bisa07g3405 525 FunFam Carboxyl-terminal-processing peptidase 1, chloroplastic 234 326 - -
Bisa07g3405 525 Gene3D - 327 503 - -
Bisa07g3405 525 FunFam Carboxyl-terminal processing protease 327 503 - -
Bisa07g3405 525 CDD Peptidase_S41_CPP 341 502 IPR004447 GO:0006508|GO:0008236
Bisa07g3405 525 PANTHER TAIL-SPECIFIC PROTEASE 135 513 - -
Bisa07g3405 525 FunFam carboxyl-terminal-processing peptidase 2, chloroplastic 161 247 - -
Bisa07g3405 525 CDD PDZ_CTP_protease 233 322 - -
Bisa07g3405 525 SMART pdz_new 234 310 IPR001478 GO:0005515
Bisa07g3405 525 SMART tsp_4 312 506 IPR005151 GO:0006508|GO:0008236
Bisa07g3405 525 SUPERFAMILY Cytochrome P450 2 38 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bisa07g3405 525 Gene3D - 161 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3405 Bisa-ChrBisa07 69368747 69380251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3405 1 44 Cytochrome P450 AT1G64940 63.636 1.71e-12 67.8