LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa07g3388	ATGTCTGATGAAGCTGGTAATAGGGAACTTTACTACCAGCACTATGAGCAGGGCGTGGGTGGATCTACCATGTTCTGGGACAATAACTTGAGTTCCTTTGTAGGTTCATCCCCATCTGGCTTTGATGACCCCTCATACTCATACATCATGAGCTTGCAAGCAGGCATGGACTACAATTCATTTGCTCCTACTTCCTTTGGCTTCACGTCTCTTTCTTCTTCAGAGGTTTACAATCAGAAGCCACCAGAGGGTGCAGGAGATTTAGGTACCCCACTCACCCACAACTCATCAGTTTGTTCCTCTTCCTCCGAAGAAGAAGATTCAGAGAAGAGCAAGAAGGAGGACAGGAAAGTGATTGATAAAGCAGAAGAGGGAACTGGTGAAGGCTCTAACTCTAACAAGAAAGGGAACAAGGGTAGGAAGAAAGGGGATGAGAAGAAGGAGAAGGAGCCAAGGTTTGCGTTCATGACAAAGAGTGAGGTTGATCAGCTTGAAGATGGTTACAGATGGAGAAAATATGGACAAAAGGCTGTGAAGAATAGCCCTTACCCAAGGAGCTACTACAGATGCACAACACAGAAGTGTGGGGTGAAGAAACGGGTGGAGAGGTGGTACGAGGACCCAACCACAGTGATAACAACGTATGAGGGTCAGCACAACCATCCGGTGCCCACATCGGCGGCGAGAGGGAATGCGGACGCCATGTTCAGTAGTAGTACTCCTCCTCCCGACTACGCCCTCCTTCACCACATTCTCCCTGATTCCTTCTTCCTTCCTTAA	780	0.4821	MSDEAGNRELYYQHYEQGVGGSTMFWDNNLSSFVGSSPSGFDDPSYSYIMSLQAGMDYNSFAPTSFGFTSLSSSEVYNQKPPEGAGDLGTPLTHNSSVCSSSSEEEDSEKSKKEDRKVIDKAEEGTGEGSNSNKKGNKGRKKGDEKKEKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCGVKKRVERWYEDPTTVITTYEGQHNHPVPTSAARGNADAMFSSSTPPPDYALLHHILPDSFFLP	259

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa07g3388	259	SMART	WRKY_cls	164	223	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g3388	259	Pfam	WRKY DNA -binding domain	165	222	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g3388	259	Gene3D	WRKY domain	149	225	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g3388	259	ProSiteProfiles	WRKY domain profile.	159	224	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g3388	259	SUPERFAMILY	WRKY DNA-binding domain	156	224	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g3388	259	MobiDBLite	consensus disorder prediction	103	152	-	-
	Bisa07g3388	259	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	87	231	IPR044810	GO:0003700
	Bisa07g3388	259	MobiDBLite	consensus disorder prediction	74	152	-	-
	Bisa07g3388	259	FunFam	WRKY transcription factor 57	150	224	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa07g3388	Bisa-ChrBisa07	69104530	69105597	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa07g3388	1	226	WRKY Transcription Factor Family	AT4G18170	47.154	1.76e-53	174

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Bisa07g3388		WRKY	1.5e-24	CL0274