Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3383 ATGGGGTTTAGAAATTTGGGGCAATTTGGGGTCTTTGTCAAAGAAGGATGGGATAAAGCATTGTCAGTTGCAGAATTCTTCTGTTTTCTTCATGTCACTGGCACATATCTCGTGAGCCCTGCTGTTGTAAGTATGCTCACTCTCTCTCTCTATATTTATCTTTCTCCCTCCCCTTTCCTTTTGATCCTGTTTCATGATAAAGAACCAAGGGGTGGTCTAATTATGCAGACCTTTGGTCCTAGCATGCTTCCGACAATTGATTCGACGGTTGGCATTGTATTTTCCGAAAAAATCTCTACTCGATCTGGTAAGGCTGTGCGTGGAGATATTGTTGTTTTGCAGTCACCGCAAAACCCTTGCAAGTTCATGACCAAGCGCTTGCTCGGTTTGGAGGGTGATAGTGTCACATTTGTTGTTGATCCTAAGAACAGTGATAAATGCGAGACTGTTGTGGTTCCCAAGGGACATGTTTGGGTACAAGGAGATAACATATACAACTCCAATGATTCAAGACAATTTGGTGCTGTTCCCTATGGCCTTCTTCATAGCAGGGTATTCTGGAAGATATGGCCACCTAAAACTTTTGGACCCTTGGGCAGAGACTAA 606 0.434 MGFRNLGQFGVFVKEGWDKALSVAEFFCFLHVTGTYLVSPAVVSMLTLSLYIYLSPSPFLLILFHDKEPRGGLIMQTFGPSMLPTIDSTVGIVFSEKISTRSGKAVRGDIVVLQSPQNPCKFMTKRLLGLEGDSVTFVVDPKNSDKCETVVVPKGHVWVQGDNIYNSNDSRQFGAVPYGLLHSRVFWKIWPPKTFGPLGRD 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3383 201 FunFam Inner membrane protease subunit 1 72 197 - -
Bisa07g3383 201 Pfam Signal peptidase, peptidase S26 146 190 IPR019533 GO:0004252|GO:0006465
Bisa07g3383 201 Pfam Signal peptidase, peptidase S26 79 137 IPR019533 GO:0004252|GO:0006465
Bisa07g3383 201 Gene3D Umud Fragment, subunit A 74 196 - -
Bisa07g3383 201 SUPERFAMILY LexA/Signal peptidase 77 198 IPR036286 -
Bisa07g3383 201 CDD S26_SPase_I 79 185 IPR019533 GO:0004252|GO:0006465
Bisa07g3383 201 PRINTS Bacterial leader peptidase 1 (S26A) family signature 152 171 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa07g3383 201 PRINTS Bacterial leader peptidase 1 (S26A) family signature 123 135 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa07g3383 201 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 11 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3383 Bisa-ChrBisa07 69019434 69020363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3383 82 199 MADS-box Gene Family AT1G29960 54.237 2.54e-45 144