Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3355 ATGCCCACTCGCTGGTCCTTCCAGGACTTCAAATTGTTCTACGAGGCCAAGTTTGGTAGGAAGAGAATCTTGGAGAATGGCGAGACTGCTGATAAACCTGTCAGTAATGGAAGTTCTTCGGGCATTGCGTGCAATGGCAATCTTCACGCCAAAAGATCATCGGATATGGCTATCTATGAGCAATTTCAAAACCAGGGGCAGAATTCAAACTACTCAAATGGTTTTTCACCAGACAATAACGATGAAAGGCCCCAGAAATCTTTGCTTCCACCTTTTGAATCTGCAGAAATGCGTACTCTAGCAGAGAGCTTAAGTAGGGATATCATTCGTGGGAGTCCAGACGTCAAGTGGGAAAGCATCAAGGGATTAGAAACTGCCAAACGTTTACTGAAAGAGGCTGTTGTGATGCCAATCAAGTATCCCAAGTATTTTACTGGCCTATTATCACCATGGAAAGGTATTCTTCTTTTTGGGCCCCCAGGAACAGGAAAGACAATGCTTGCTAAGGCAGTTGCAACAGAGTGCAAGACTACATTTTTTAATATTTCTGCGTCCTCTGTTGTCAGCAAATGGCGAGGCATTTCACCTTATATTGCAGGTGATTCAGAAAAGTTAGTGAAGGTATTATTTGAGCTTGCTAGGCACCATGCACCCTCAACAATATTTCTTGATGAAATTGATGCAATCATTAGTCAACGTGGTGAAGCACGCACTGAGCATGAAGCAAGTAGACGATTAAAAACTGAGCTACTTATACAGATGGATGGCTTGACGTGTACTGATGAACTTGTTTTTGTTTTGGCGGCAACAAATCTGCCCTGGGAACTGGATGCAGCCATGCTCCGACGTCTTGAGAAGCGAATCCTTGTGCCACTTCCAGATCCAGAAGCAAGAAAAGCAATGTTTGACGAACTCCTTCCACCACAGCCTGATGAGGAGCAGATCCCCTATGATTTACTGGTGGAGAAGACAAAAGGATATTCAGGTTCAGATATTCGGTTATTGTGCAAAGAGGCAGCAATGCAGCCCTTGAGACGGTTAATGTCACAACTTGAACAGAGACAGGAGGTGGTGCCAGAAGAAGAGTTGCCAAAAGTCGGGCCTATCAGACCTGAAGATATAGAGGCTGCTTTGAAAAACACGAGACCATCTGCTCATCTCCTTGCCCGAAAATATGAAAAGTTTAATGCTGATTATGGAAGTCAAATACTCAAATGA 1218 0.4392 MPTRWSFQDFKLFYEAKFGRKRILENGETADKPVSNGSSSGIACNGNLHAKRSSDMAIYEQFQNQGQNSNYSNGFSPDNNDERPQKSLLPPFESAEMRTLAESLSRDIIRGSPDVKWESIKGLETAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGISPYIAGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARTEHEASRRLKTELLIQMDGLTCTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPDPEARKAMFDELLPPQPDEEQIPYDLLVEKTKGYSGSDIRLLCKEAAMQPLRRLMSQLEQRQEVVPEEELPKVGPIRPEDIEAALKNTRPSAHLLARKYEKFNADYGSQILK 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3355 405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 384 IPR027417 -
Bisa07g3355 405 CDD RecA-like_VPS4-like 120 290 - -
Bisa07g3355 405 PANTHER AAA DOMAIN-CONTAINING 62 401 - -
Bisa07g3355 405 MobiDBLite consensus disorder prediction 68 83 - -
Bisa07g3355 405 Gene3D - 113 396 IPR027417 -
Bisa07g3355 405 Pfam AAA+ lid domain 318 354 IPR041569 -
Bisa07g3355 405 FunFam Katanin p60 ATPase-containing subunit A-like 2 113 304 - -
Bisa07g3355 405 MobiDBLite consensus disorder prediction 68 92 - -
Bisa07g3355 405 Pfam ATPase family associated with various cellular activities (AAA) 154 291 IPR003959 GO:0005524|GO:0016887
Bisa07g3355 405 FunFam Katanin p60 ATPase-containing subunit A-like 2 293 381 - -
Bisa07g3355 405 SMART AAA_5 150 294 IPR003593 GO:0016887
Bisa07g3355 405 Gene3D - 293 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3355 Bisa-ChrBisa07 68751777 68759262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3355 148 364 Calmodulin-binding Proteins AT3G56690 35.000 8.39e-29 117