Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3332 ATGGCTGCAATTTTTGCGTCCAAATGTTCCCGAGTGGGCCGTTCTCTATTTGGTGGGCTAGGCAACAGTTTATCTGGTTTAGTTACTACATCACATGACCTGGCATGCGGCAATTTCTTGTCTCAGCAGCAACGTACATTTATACAGATGAGGACTGTTCTCAAGGTTGTGGATAATTCGGGGGCCAAGAAGGTAATGTGCATACAAGCTCTGAAAGGGAAGAAAGGTGCAAGATTGGGTGACACAATAATTGCATCAGTGAAGGAAGCCCATCCTAACGGAAAAGTTAAAAAAGGAAAAGTTGTGTATGGCGTGGTTGTGCGTGCAGCCATGCAACGGGGGCGATGTGATGGCAGTGAGATCAAGTTTGATGATAATGCTGTGGTGCTTGTTGACAAGCAAGGCCAGCCGATTGGGACGAGAGTTTTTGGGCCAGTCCCGCATGAACTGAGGATGAAGAAGCATGTCAAAATACTTACCTTAGCAGGGCACATCGCATAA 501 0.4671 MAAIFASKCSRVGRSLFGGLGNSLSGLVTTSHDLACGNFLSQQQRTFIQMRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSEIKFDDNAVVLVDKQGQPIGTRVFGPVPHELRMKKHVKILTLAGHIA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3332 166 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 48 165 IPR000218 GO:0003735|GO:0005840|GO:0006412
Bisa07g3332 166 FunFam 50S ribosomal protein HLP, mitochondrial-like 47 166 - -
Bisa07g3332 166 Hamap 50S ribosomal protein L14 [rplN]. 47 166 IPR000218 GO:0003735|GO:0005840|GO:0006412
Bisa07g3332 166 NCBIfam 50S ribosomal protein L14 48 165 IPR005745 GO:0003735|GO:0006412|GO:0015934
Bisa07g3332 166 ProSitePatterns Ribosomal protein L14 signature. 104 130 IPR019972 -
Bisa07g3332 166 SUPERFAMILY Ribosomal protein L14 48 165 IPR036853 GO:0003735|GO:0005840|GO:0006412
Bisa07g3332 166 Gene3D Ribosomal protein L14 47 166 IPR036853 GO:0003735|GO:0005840|GO:0006412
Bisa07g3332 166 SMART Ribosomal_L14_2 47 166 IPR000218 GO:0003735|GO:0005840|GO:0006412
Bisa07g3332 166 Pfam Ribosomal protein L14p/L23e 48 165 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3332 Bisa-ChrBisa07 68375937 68377816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3332 58 149 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.364 2.52e-09 50.8