Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3322 ATGCTGAAAGAAGGCAACAATGGCGTCACTGGTAATAGCTGGGCACGCATATGCGACACGTGCCGCTCCGCTCCCTGCACCGTTTACTGCCGCGCCGACCTCGCTTACCTCTGCTCTGGCTGCGACGCCCGCATCCACGCCGCCAACCGCGTCGCCTGTCGCCACGAGCGTGTCTGGGTCTGCGAGGCCTGCGAGCGAGCCCCTGCTGCCTTCGTCTGCAAGGCCGACGCCGCCTCCCTCTGCTCCTCCTGCGACGCCGACATCCACTCCGCCAACCCCCTCGCCAGCCGCCACCACCGTGTCCCCATCCTCCCCATATACGGCCCTCCTTCCCTTCCTGACGGGGATGACGCCTTTCTAGACGCAGAGGAGGACGACGTTGTTGATGAAGAAGATGAAGACGAGGCTGCGTCCTGGTTGTTGCTCAATCCCGTCAAGAACAACAGCAGCAACAACAACAATTATCAGAGTAACACTGGGTTCTTGTTTGGTAGTGGGGAGGTTGATGATTATTTGGACCTCATAGATTGCAATTCGTGTGGTGAAAACCAGTTAACTGGTCATTACAATCAGGATCAGCATTATGGTGTCCCTCGCAAGACCTATACCGGCGATAGCGTCGTCCCCGTTCAGCAACGCCAGCAATTTCAGCCGGGATTGGACTTCGATTCCTCCAAAGCTGTCTACCCTTTCAACGCTTCTGTTCCTCAAAACATTTCAGTGTCGTCAGTAGATGTTGGGATTGTACCAGAATCAAGCCTTAGCGATGTGTCCATTCCGCATTCAAGACCCCCAAAAGGGACAGTTGACCTATTTTCTGGGCCTCCTCTTCAGATACCATCCCAACTTACCCCAGTGGACAGGGAGGCCAGGGTGTTGAGATATAGGGAGAAAAAGAAGACAAGAAAGTTTGAGAAGACGATAAGGTATGCCTCCAGGAAAGCCTATGCTGAGACTAGACCTCGCATCAAAGGTCGATTTGCGAAGAGAACAGAGGTTGAGGCTGAAGTGGACCAGTTGTTCTCCCCAACGCTAATGTCTGAAAATGGATATGGCGTTGTTCCCTCCTTCTGA 1074 0.541 MLKEGNNGVTGNSWARICDTCRSAPCTVYCRADLAYLCSGCDARIHAANRVACRHERVWVCEACERAPAAFVCKADAASLCSSCDADIHSANPLASRHHRVPILPIYGPPSLPDGDDAFLDAEEDDVVDEEDEDEAASWLLLNPVKNNSSNNNNYQSNTGFLFGSGEVDDYLDLIDCNSCGENQLTGHYNQDQHYGVPRKTYTGDSVVPVQQRQQFQPGLDFDSSKAVYPFNASVPQNISVSSVDVGIVPESSLSDVSIPHSRPPKGTVDLFSGPPLQIPSQLTPVDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTEVEAEVDQLFSPTLMSENGYGVVPSF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3322 357 ProSiteProfiles Zinc finger B-box type profile. 13 60 IPR000315 GO:0008270
Bisa07g3322 357 CDD Bbox1_BBX-like 17 60 - -
Bisa07g3322 357 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 18 346 IPR045281 GO:0009909
Bisa07g3322 357 Pfam B-box zinc finger 58 103 IPR000315 GO:0008270
Bisa07g3322 357 ProSiteProfiles CCT domain profile. 288 330 IPR010402 GO:0005515
Bisa07g3322 357 Pfam CCT motif 288 330 IPR010402 GO:0005515
Bisa07g3322 357 CDD Bbox1_BBX-like 60 103 - -
Bisa07g3322 357 ProSiteProfiles Zinc finger B-box type profile. 56 103 IPR000315 GO:0008270
Bisa07g3322 357 SMART bboxneu5 13 60 IPR000315 GO:0008270
Bisa07g3322 357 SMART bboxneu5 61 103 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3322 Bisa-ChrBisa07 68291186 68293098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3322 1 357 C2C2-CO-like Transcription Factor Family AT3G02380 56.486 3.46e-134 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bisa07g3322 zf-B_box 3.7e-07 No_clan