Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3310 ATGGCTCACTCCTCTTCCTCTCAGGTTCCATACCCTTTTCCCCTCGATGATGAATTTGAAGAATCCGACCCCGATGAACAGGTATGTGATCTCCCATCACTGTATCCCCAAGATCATTGGTGCACCGACTCCTCCAATCCTTTTGCAACCGTGTCGTTCGACCATTTGAGCAACCATTCAAACTGGTATTCTGATTCGGACTCCGATTCGGTGAGCTGCTTTGTCACAGATCTTTTTGGAAATCGCTCCTCGGAACATTCTCACCATCGCTGCGATGATAGTTCTGATATTAATCCGTTTTCCGGGGTCCTCTGCGATGGTCACGGGGGAGAAGGATCAAGTTATGCGGAGATAGAATTAGGGTCTGGATTTGGAACGGAAAAAGATGATGGGATTTCCGCATTAGGTGAGATATCGGGCTCAGAAAGGGTTCGTTCGCACGCGGATGGTCTTAGAATTGTCGGTTTCAGTTCGGATTCGGATTCAAATAGTGACGAGGAGCTTGACAGGGCGATTGAATTCAGTTCTGGTGAAAATGATGGCAATAGAATTAATGGCTTTGACGATTTGGATGTTCGTTTATGTTGGGACAACCTTTGTTTGGAGGATCAGAGGATCCTCAATGAGCATTCTGAATGGGACGATTTAGGGGAAAGGGTCAATGATGGAGAAGACATGAGCGTGGTGATCGGTGAGGTTGATGATCAGTCAGTAGCATCTGGATTTTCCTATGGAGAAGATCCAGGTGAAGAGGCATTGAGATACCTTGAATGGGAAATTCTGTTAGCTGTTAACAATTTGGAGAGGAATTCAAGCTTCGAACATGATGCAACTGCAGGTTCCTTTTTAACGGTACAGGATGATGGTTATATGTATACAGCTGAGTATGATATATTTTTTGGGCAATTCCTGGAAAACGAGAGTTCTTTAAAGGGTAGTCCTCCCACAGCTAAAAGTGTTATGGAGAATCTACCTTTAGTAGAATTGACAAAGGATGACTTGCAGGGAGAGAATGTAGCTTGTGCTGTTTGCAAAGATGAAATCCTATGGAAGGAGAAGGTGAGGAGGCTGCCCTGCTCCCACTTTTACCATGGGGACTGCATTATGCCATGGTTGAGCATTCGTAATACATGCCCTGTTTGTCGGTTTGAGTTGCCCACAGATGATCCCGATTATGAGCAGAGGAAGAGTCAGAGAACTGCTCATGATCTGTTGGAGTTTGCAGTGCAGATGCAAATTTAA 1242 0.4509 MAHSSSSQVPYPFPLDDEFEESDPDEQVCDLPSLYPQDHWCTDSSNPFATVSFDHLSNHSNWYSDSDSDSVSCFVTDLFGNRSSEHSHHRCDDSSDINPFSGVLCDGHGGEGSSYAEIELGSGFGTEKDDGISALGEISGSERVRSHADGLRIVGFSSDSDSNSDEELDRAIEFSSGENDGNRINGFDDLDVRLCWDNLCLEDQRILNEHSEWDDLGERVNDGEDMSVVIGEVDDQSVASGFSYGEDPGEEALRYLEWEILLAVNNLERNSSFEHDATAGSFLTVQDDGYMYTAEYDIFFGQFLENESSLKGSPPTAKSVMENLPLVELTKDDLQGENVACAVCKDEILWKEKVRRLPCSHFYHGDCIMPWLSIRNTCPVCRFELPTDDPDYEQRKSQRTAHDLLEFAVQMQI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3310 413 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 212 386 - -
Bisa07g3310 413 ProSiteProfiles Zinc finger RING-type profile. 341 382 IPR001841 -
Bisa07g3310 413 Pfam Ring finger domain 341 382 IPR001841 -
Bisa07g3310 413 SUPERFAMILY RING/U-box 323 389 - -
Bisa07g3310 413 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 302 388 IPR013083 -
Bisa07g3310 413 MobiDBLite consensus disorder prediction 1 27 - -
Bisa07g3310 413 FunFam E3 ubiquitin-protein ligase RING1-like 302 388 - -
Bisa07g3310 413 SMART ring_2 341 381 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3310 Bisa-ChrBisa07 68171885 68173126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3310 146 397 C3H Transcription Factor Family AT3G02340 39.777 8.96e-46 161