Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3300 ATGGTTCATCAAGCTAATTTAGTTATCATTGGTGTCACTGCTGGTTTGGTCCTTGGACTTTTCATAGCTTCCCTCATCTTTTTTGGCGTAAGGTGGTACAAGAAACGTGCTAATCTTAGACAATCTGCAAAAGAGTGTAGTTTGACAACTCTTCCAATACGCACAAATGGATTAGGAACAAGCACTGACTTTAGTGCCTCTCTCACAAGTTCCATAGCTGCTTCAATGTCTGAAAATCTGCACAAAAACTCCCATTTCTCTTGGTGGAATAATCAAAACAAAGATCGGTTTTCTCCAGCATCAGGCGTTTTAAAGTATACTTACAAAGAAATCCAAAAGGCCACAAAGAATTTCACAACTGTTTTGGGACAAGGATCATTTGGCGCAGTTTATAAAGCCACAATGCCTACAGGAGAGGTGGTTGCTGTGAAGGTGCTTGCTTCTAATTCCAGTCAAGGGGAGAAAGAATTCCAAACCGAGGTGCTTCTGTTAGGAAGACTGCATCATCGGAATCTTGTGAATTTGGTAGGATATTGTGTAGATAAAGGACAGCGCATACTGATTTATGAGTTCATGAGCAATGGAAGTTTATCAAACCTTCTTTACAGTGAAGAAAAGGATTTGAGTTGGAATGAAAGGCTTCAAATTGTTATTGATATTTCACATGGAATCGAATACCTTCACGAAGGAGCAGTCCCACCTGTCATACATCGTGATTTGAAGTCTGCCAATATATTGTTAGACCACTCAATGAGAGCTAAGGTTGCTGATTTCGGGCTCTCAAAGGAAGAGGTCTTCGATGGCCGGAATTCTGGCCTTAAAGGTACATACGGCTACATGGACCCAACATACATTTCTACAAACAAGTTCACAATGAAGAGTGACATCTACAGTTTTGGTATAATCATATTTGAGCTCATTACAGCCATTCACCCACACCAAAATTTGATGGAATATGTTAACCTTGCTGCAATGGACCATGACGGTGTAGATGAGATACTTGACAAGCAACTCGTAGGAAAATGCAACCTTGAAGAAGTGAGGCAGCTTGCTAAAGTTGCACACAAATGTTTGCACAAATCACCTAGGAAACGCCCCTCTATCGGTGAGGCATCGCAGGGTATATTGAGGATCAAAGAAAGGCGCCTTAAGAAAGAAGATACCATGTCATTTGCAGGCAGTAACTTTTCCAGGGCCTTGAGTCGAATAGAGGATCAACAGGTTGAACTTAGGGTAATCACCATGGACCACAGAGAAACTGGATAA 1266 0.4131 MVHQANLVIIGVTAGLVLGLFIASLIFFGVRWYKKRANLRQSAKECSLTTLPIRTNGLGTSTDFSASLTSSIAASMSENLHKNSHFSWWNNQNKDRFSPASGVLKYTYKEIQKATKNFTTVLGQGSFGAVYKATMPTGEVVAVKVLASNSSQGEKEFQTEVLLLGRLHHRNLVNLVGYCVDKGQRILIYEFMSNGSLSNLLYSEEKDLSWNERLQIVIDISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEVFDGRNSGLKGTYGYMDPTYISTNKFTMKSDIYSFGIIIFELITAIHPHQNLMEYVNLAAMDHDGVDEILDKQLVGKCNLEEVRQLAKVAHKCLHKSPRKRPSIGEASQGILRIKERRLKKEDTMSFAGSNFSRALSRIEDQQVELRVITMDHRETG 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3300 421 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Bisa07g3300 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Bisa07g3300 421 Gene3D Phosphorylase Kinase; domain 1 77 191 - -
Bisa07g3300 421 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 90 191 - -
Bisa07g3300 421 SUPERFAMILY Protein kinase-like (PK-like) 87 371 IPR011009 -
Bisa07g3300 421 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 192 399 - -
Bisa07g3300 421 Pfam Protein tyrosine and serine/threonine kinase 118 370 IPR001245 GO:0004672|GO:0006468
Bisa07g3300 421 ProSiteProfiles Protein kinase domain profile. 116 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g3300 421 SMART serkin_6 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g3300 421 Gene3D Transferase(Phosphotransferase) domain 1 192 398 - -
Bisa07g3300 421 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 380 - -
Bisa07g3300 421 CDD STKc_IRAK 122 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3300 Bisa-ChrBisa07 68024746 68028170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3300 102 370 Receptor kinase-like Gene Family AT3G19300 42.806 2.15e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Bisa07g3300 PK_Tyr_Ser-Thr 4.8e-51 CL0016