Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa07g3279 | ATGGTGATTTATATGGCGCCTCCGAGGAAGTCAATAGCAAAGAAGGTGTTTCAGAGGGTAGGAGGATACTGCCATGGGAGTCACAATCAGAGGAGGTGTGCCAATGAGACACAGAGCTTCCTTCACGACGACGATAAGACAATGAGCATAGAGAAGCTTGAGGGCATTTCTAACATTAGTGCATGTTTTTCGCCTTTCTCAACCTCTTTCCTCTTCCTGCTAGAGTCTTTCGTGTTCCCTGGTGTGGAAGAAAAGCGATGTGGAAAAGTAATGAATCTACGCGTTTCATTATGCGAAATTGCTACCAAATACCAAATTGTTGAACAATATAAGAATGGACTGATTCCTTTCTCAGTCCAAAGTGCCGATTCCCGAGTCAGCTCATTCGGCCAGACCGAGATTAACTGGGACAAGCTTGATAAAACTAAGTTCTATGTTGTAGGAGCTGGACTCTTTACAGGTGTTACAGTGGCACTGTACCCTGTTTCTGTTGTGAAAACTAGACTGCAGGTTGCTTCAAAGGATACTGCAGAGAGAAATGTGTTTTCTGTTGTAAAGGGATTACTTAAAACAGATGGCTTTCCTGGTCTATATAGAGGGTTTGGCACAGTTATCATCGGTGCAGTTCCTGCCAGAGTCATATTTCTTACTGCTCTAGAGACCACTAAGGTGGCTACCTTCAGGATGCTTGACCCATTTAGATTCTCTGAAACCACCCAGGCAGCCATAGCAAATGGAGTTGCAGGCTTGACATCATCACTTTTTGCTCAAGCTGTGTTTGTTCCAATTGACGTGGTTAGCCAAAAATTGATGGTGCAAGGATACTCAGGCCATGCACAATATAGCGGCGGTCTGGATGTTGCTCGTAAGGTATTGAAATCAGATGGCATCAGAGGATTATATAAAGGATTTGGTCTATCCGTTATGACTTATGCACCTTCTAGTGGTGTATGGTGGGCAAGTTATGGTTCAAGCCAACGCTTAATTTGGAGATACTTGGGATATAGTGCTGAATACAAGGAAGGCAAACCTGGAGTGCAGAAGATTATGTTAGTTCAGGCTACTGGAGGAATTATTGCTGGCGCAACTGCATCCTGCATTACAACACCATTGGATACAATTAAGACACGACTACAGGTGATGGGACATGAAAAGAGAAGCTCTGTGAAACAAGTTGTCAAAGATTTAATAAATGAGGATGGTTGGAATGGTTTATACAGAGGTTTAGGTCCAAGATTTTTCAGCATGTCGGCATGGGGCACTTCAATGATATTGGCATATGAATATCTGAAGCGCTTGTGTGCAAAAGATGAATAA | 1317 | 0.4305 | MVIYMAPPRKSIAKKVFQRVGGYCHGSHNQRRCANETQSFLHDDDKTMSIEKLEGISNISACFSPFSTSFLFLLESFVFPGVEEKRCGKVMNLRVSLCEIATKYQIVEQYKNGLIPFSVQSADSRVSSFGQTEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVASKDTAERNVFSVVKGLLKTDGFPGLYRGFGTVIIGAVPARVIFLTALETTKVATFRMLDPFRFSETTQAAIANGVAGLTSSLFAQAVFVPIDVVSQKLMVQGYSGHAQYSGGLDVARKVLKSDGIRGLYKGFGLSVMTYAPSSGVWWASYGSSQRLIWRYLGYSAEYKEGKPGVQKIMLVQATGGIIAGATASCITTPLDTIKTRLQVMGHEKRSSVKQVVKDLINEDGWNGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDE | 438 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa07g3279 | 438 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 141 | 225 | IPR018108 | - | |
| Bisa07g3279 | 438 | FunFam | Mitochondrial substrate carrier family protein | 145 | 437 | - | - | |
| Bisa07g3279 | 438 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 124 | 437 | - | - | |
| Bisa07g3279 | 438 | Gene3D | Mitochondrial carrier domain | 144 | 438 | IPR023395 | - | |
| Bisa07g3279 | 438 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 348 | 433 | IPR018108 | - | |
| Bisa07g3279 | 438 | PRINTS | Mitochondrial carrier protein signature | 157 | 171 | IPR002067 | GO:0055085 | |
| Bisa07g3279 | 438 | PRINTS | Mitochondrial carrier protein signature | 357 | 379 | IPR002067 | GO:0055085 | |
| Bisa07g3279 | 438 | PRINTS | Mitochondrial carrier protein signature | 301 | 319 | IPR002067 | GO:0055085 | |
| Bisa07g3279 | 438 | SUPERFAMILY | Mitochondrial carrier | 137 | 430 | IPR023395 | - | |
| Bisa07g3279 | 438 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 240 | 328 | IPR018108 | - | |
| Bisa07g3279 | 438 | Pfam | Mitochondrial carrier protein | 149 | 224 | IPR018108 | - | |
| Bisa07g3279 | 438 | Pfam | Mitochondrial carrier protein | 243 | 331 | IPR018108 | - | |
| Bisa07g3279 | 438 | Pfam | Mitochondrial carrier protein | 352 | 437 | IPR018108 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa07g3279 | Bisa-ChrBisa07 | 67716804 | 67722536 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa07g3279 | 134 | 438 | Chloroplast and Mitochondria Gene Families | AT5G15640 | 75.896 | 1.12e-170 | 479 |