Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3260 ATGTTTCCTTCTTTTTCTTCTTCTCCGACTTCACTGATCAAATGGCGTTTCTTTCACAAGCCCATGTCTCCTCTGTTTGTTCTTGAATTCTACTTTCTGTTATGGGTCGTCTTCACGTCTCGGAGTGACGCCGTCCCCGCCGATTCAGACAAATCAGTCCTTCTTCAGTTCAAGAATTCAGTCTCCGATCCATCAGGGCTGCTTTCGAGTTGGAGTAAGGCTGGCGGTTCTAATCACTGTTCCTGGGTCGGTGTCTCCTGCGACTCCAGTTCACGGGTTGTCTCCCTCAACATTACTGGAAATGGTGGTGGAGGTAATCGAAGTTCTTTTCCGTGTTCCGATCATACTGAATTCCCACTTTATGGGTTTGGAATCAGGAGGAGCTGTGGCAGTAGTAGAGGAGCATTGTTTGGAAAGGTTTCGCCTTTAATTAGTAAGTTTACTGAGCTCAGGATTCTGTCACTTCCGTTCAATGGTTTCGAGGGTAAAATTCCTGACGAAATCTGGGGTATGCACAAGTTAGAGGTTCTCGACCTAGAGGGCAACTCCATAACTGGATTTCTTCCTTATCATTTTGATGGTTTGAGGAACTTGCGGGTTCTTAACCTCGGTTTCAATAGACTTGTTGGGGAGATACCAAACTCACTTTCGAGTCTTGGAAGTTTGGAGGTTTTGAATTTAGCTGCGAATAGCTTTAATGGATCTATTCCTGGGTTCATCGGTAAGCTCAAGGGGGTATATCTGTTGTCTAATCTGCTTAGTGGGCCTATACCACTTGAGATCGGGGATAATTGTGGGAAGCTCGAGCATCTGGACTTGTCGGGTAATTTCTTAGTTGAGGGAATTCCAAGCAGTTTGGGAAATTGCAGTCAATTACGGACACTTTTGCTGTATTCAAATATGTTGGAAGAGGTTATTCCCACCGAACTTGGTAAACTTAAGAACCTTCAAGCCTTGGATGTTTCAAGGAATGCTCTCAGTGGTCCGGTGCCTCCCGAGATTGGAAATTGTTCGGAGTTGTCTGTCCTTGTGCTGTCGAATCTTTTCAATCCACTTCCGGCAGTCAACAATACTGCTAGGGACTCCTCACAATTTGTTTCTATAAATGATGAATTGAATTATTTTGAAGGTGCCATGCCTGTGGAAATTACAACCCTTCCGAAGCTGAGAATATTGTGGGCACCAAGAGCAACACTGGAAGGCAGTTTTCCTAGCAATTGGGGTCCTTGTGATAACTTAGAGATGATCAATTTGGCTCAGAATTTTTTCACTGGGGAATTTCCTAATCAGCTTAGTGGCTGCAAGAAGCTGCACTTTCTTGATTTAAGCTCAAACAACCTTACCGGCAAATTGGCTGAAGAACTTCCTGTTCCGTGTATGACTGTGTTTGATGTTAGTGGGAACATCTTGTCAGGTTCAATTCCTGAATTTTTGAATGACACTTGTCCTTCAGTACCTTCCCGGAATGGCAATTTTTTTGAGATTGATGACGCGTCAATTCCGTATATATCCTTTTTTACATCAAAGGTTCTTGACGGATCCCTTTTGTCGTTAGTGGGAGATAAGGGTCTTTCAGTTTTTCACAACTTTGGGCAAAACAACTTCACTGGCATGCAATCATTGCCAATAGCACGTGGTAGACTGGGGAATAAACTTGTTTATGCATTCCTGGTTGGGGAAAACAAGCTTACAGGGCCGTTACCAACAAGTTTGTTTGAAAAGTGCTATGGGTTAGATGCCTTGCTCTTAAACATCAGTTATAATAGGTTATCTGGCCAGATTCCTGCAAAGTTTAGTGGAATATGCAGGTCATTAAAGTTTTTGGATGCATCTGGGAATCAGATTACAGGATCAATTCCCATTGGTTTAGGGGATTCGGTATCTCTTGTTGCTCTGAACCTCAGTAGGAATCAGTTACAAGGTCTTATTCCCACCAGCCTTGACCAGATGAAAAATCTGGTGTTTCTCTCTTTGGCCAGTAATAACTTAACTGGCTCCATTCCTGCCAGCCTGGGGCAGTTGTATTCTTTAGAAGTCTTGGATCTTTCTTCAAACTCTCTTACAGGTGAGATTCCAACCGATTTTGAGAACTTGAGAAATCTGACTGGTCTTCTGCTCAATAACAACAAACTTTCTGGACATATTCCTACTGGTTTGGTAAATGTCACTACGCTCTCGACATTTAATGTGTCCTTCAATAACTTATCTGGATCCTTGCCATCAAATAGTAACTTGATAAAATGTAGCGGTGCTGTTGGAAATCCATTTCTACGCCCTTGCTATATGTTATCTTTGACTGCGCCATCAGCAGATGAACAGGGGCAAGTAGATGGTCTCAATTCTGAAGTTGCTACGCCACCAGAAGCTAGTGGCAAAGGGAGCGGGAATGGTTTCAATTCTATTGAAATAGCATCTATAACATCTGCATCAGCGATTGTTTCTGTTCTTATAGCTCTGATTGTTCTGTTCTTTTATACCCGCAAGTGGAACTCCAGGTCCAGGGTTGTTGGTTCCACAAGAAAAGATGTTATAGTTTTTACTGAGATTGGGGTGCCATTGACTTTTGAAACTGTTGTTCGTGCCACTGGAAATTTCAATGCAAGCAACTGTATTGGAAATGGAGGATTTGGGGCAACTTACAAGGCAGAGATAGCACCTGGAAATTTAGTGGCAATAAAACGACTGTCAGTTGGACGATTCCAAGGTGTACAACAATTCGATGCAGAGATTAGGACTCTTGGAAGGCTTCGTCATCCAAATCTTGTGACTTTGATTGGTTACCATGCCAGTGAGACAGAGATGTTTCTTATATACAACTATTTACCTGGTGGTAACCTGGAAAAGTTTATCCAGGAGAGGTCCACAAGGGCTGTAGATTGGAGAATTCTTCACAAGATTGCACTGGACATAGCCCGAGCACTTGCCTACCTGCATGATCAGTGTGTACCGCGTGTCCTTCATCGCGATGTCAAGCCCAGCAATATCCTGTTGGATGATGACTTCAATGCATATCTGTCTGACTTTGGATTGGCCAGACTACTGGGAACTTCAGAAACCCATGCTACCACTGGTGTGGCAGGAACATTTGGTTATGTCGCTCCTGAATATGCCATGACTTGTCGGGTTTCCGACAAGGCTGATGTGTATAGCTACGGGGTTGTGCTTATGGAGTTACTCTCAGACAAGAAGGCATTGGATCCTTCATTTTCTTCCTATGGGAATGGCTTCAACATAGTAGCATGGGCGTGCCTGCTACTGAGGCAAGGGCGAGCAATGGAGTTCTTTACCGCCGGGCTATGGGATGCGGGACCCTCGGATGATTTGGTAGAGGTCTTACACTTGGCCATTATGTGCACCGTTGATTCCCTCTCCACAAGACCTTCGATGAAACAGGTTGTACGAAGGCTGAAGCAACTTCAACCGCCATCATGCTAG 3435 0.4396 MFPSFSSSPTSLIKWRFFHKPMSPLFVLEFYFLLWVVFTSRSDAVPADSDKSVLLQFKNSVSDPSGLLSSWSKAGGSNHCSWVGVSCDSSSRVVSLNITGNGGGGNRSSFPCSDHTEFPLYGFGIRRSCGSSRGALFGKVSPLISKFTELRILSLPFNGFEGKIPDEIWGMHKLEVLDLEGNSITGFLPYHFDGLRNLRVLNLGFNRLVGEIPNSLSSLGSLEVLNLAANSFNGSIPGFIGKLKGVYLLSNLLSGPIPLEIGDNCGKLEHLDLSGNFLVEGIPSSLGNCSQLRTLLLYSNMLEEVIPTELGKLKNLQALDVSRNALSGPVPPEIGNCSELSVLVLSNLFNPLPAVNNTARDSSQFVSINDELNYFEGAMPVEITTLPKLRILWAPRATLEGSFPSNWGPCDNLEMINLAQNFFTGEFPNQLSGCKKLHFLDLSSNNLTGKLAEELPVPCMTVFDVSGNILSGSIPEFLNDTCPSVPSRNGNFFEIDDASIPYISFFTSKVLDGSLLSLVGDKGLSVFHNFGQNNFTGMQSLPIARGRLGNKLVYAFLVGENKLTGPLPTSLFEKCYGLDALLLNISYNRLSGQIPAKFSGICRSLKFLDASGNQITGSIPIGLGDSVSLVALNLSRNQLQGLIPTSLDQMKNLVFLSLASNNLTGSIPASLGQLYSLEVLDLSSNSLTGEIPTDFENLRNLTGLLLNNNKLSGHIPTGLVNVTTLSTFNVSFNNLSGSLPSNSNLIKCSGAVGNPFLRPCYMLSLTAPSADEQGQVDGLNSEVATPPEASGKGSGNGFNSIEIASITSASAIVSVLIALIVLFFYTRKWNSRSRVVGSTRKDVIVFTEIGVPLTFETVVRATGNFNASNCIGNGGFGATYKAEIAPGNLVAIKRLSVGRFQGVQQFDAEIRTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLMELLSDKKALDPSFSSYGNGFNIVAWACLLLRQGRAMEFFTAGLWDAGPSDDLVEVLHLAIMCTVDSLSTRPSMKQVVRRLKQLQPPSC 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3260 1144 ProSitePatterns Protein kinases ATP-binding region signature. 871 893 IPR017441 GO:0005524
Bisa07g3260 1144 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 291 1138 - -
Bisa07g3260 1144 SUPERFAMILY L domain-like 530 761 - -
Bisa07g3260 1144 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 262 353 - -
Bisa07g3260 1144 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 941 1143 - -
Bisa07g3260 1144 SUPERFAMILY L domain-like 48 348 - -
Bisa07g3260 1144 CDD STKc_IRAK 871 1139 - -
Bisa07g3260 1144 ProSiteProfiles Protein kinase domain profile. 865 1139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g3260 1144 Gene3D Transferase(Phosphotransferase) domain 1 941 1142 - -
Bisa07g3260 1144 Gene3D Ribonuclease Inhibitor 47 244 IPR032675 -
Bisa07g3260 1144 Pfam Leucine rich repeat 149 208 IPR001611 GO:0005515
Bisa07g3260 1144 Pfam Leucine rich repeat 656 711 IPR001611 GO:0005515
Bisa07g3260 1144 Pfam Leucine rich repeat 267 326 IPR001611 GO:0005515
Bisa07g3260 1144 Pfam Leucine rich repeat N-terminal domain 47 88 IPR013210 -
Bisa07g3260 1144 SUPERFAMILY Protein kinase-like (PK-like) 848 1136 IPR011009 -
Bisa07g3260 1144 Pfam Protein kinase domain 868 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g3260 1144 SMART LRR_typ_2 698 722 IPR003591 -
Bisa07g3260 1144 SMART LRR_typ_2 171 194 IPR003591 -
Bisa07g3260 1144 SMART LRR_typ_2 674 697 IPR003591 -
Bisa07g3260 1144 SMART LRR_typ_2 627 649 IPR003591 -
Bisa07g3260 1144 SMART LRR_typ_2 265 289 IPR003591 -
Bisa07g3260 1144 SMART LRR_typ_2 650 673 IPR003591 -
Bisa07g3260 1144 SMART LRR_typ_2 313 337 IPR003591 -
Bisa07g3260 1144 SMART LRR_typ_2 195 219 IPR003591 -
Bisa07g3260 1144 Gene3D Phosphorylase Kinase; domain 1 826 940 - -
Bisa07g3260 1144 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 523 765 - -
Bisa07g3260 1144 SMART serkin_6 865 1143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g3260 1144 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 829 940 - -
Bisa07g3260 1144 Gene3D Ribonuclease Inhibitor 351 505 IPR032675 -
Bisa07g3260 1144 Gene3D Ribonuclease Inhibitor 245 350 IPR032675 -
Bisa07g3260 1144 PRINTS Leucine-rich repeat signature 437 450 - -
Bisa07g3260 1144 PRINTS Leucine-rich repeat signature 674 687 - -
Bisa07g3260 1144 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 360 489 - -
Bisa07g3260 1144 SUPERFAMILY L domain-like 371 479 - -
Bisa07g3260 1144 ProSitePatterns Serine/Threonine protein kinases active-site signature. 985 997 IPR008271 GO:0004672|GO:0006468
Bisa07g3260 1144 MobiDBLite consensus disorder prediction 772 793 - -
Bisa07g3260 1144 Gene3D Ribonuclease Inhibitor 524 764 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3260 Bisa-ChrBisa07 67545401 67548835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3260 44 1144 Receptor kinase-like Gene Family AT3G02130 65.984 0.0 1391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Bisa07g3260 Pkinase 3.6e-43 CL0016