Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3255 ATGGCATTCATCAACAAGATTGGGAAGCTTCTCAAGCATTCTGCTGTTAAGAACATCAATCTAGAACTTTCTGCATCTACTCCATCAATTTACCATGCAATCAGGTCCTTGTCATCTGCAAAGCTTTTTGTTGGAGGTGTTTCATATAGTACAGATGATATGGGCCTGAGAGAAGCCTTTTCTTCTTATGGAGAGATAATTGATGCAAGGATAATTTTGGACCGGGAGACTGGTAGGTCCAGAGGTTTTGGCTTTGTAACTTTTACATCAAGTGAGGAGGCATCTGCTGCTGTTCAGGCAATGGATGGATCGGATCTTCATGGTCGGAGGATACGGGTAAACTATGCTACAGAAAGGTCACGTCCAGGGTTTGGTGGTGGCAGCAGTGGTGGCTATGCCAGAAGTAACTATGGAGGTGGTGATAACTATAGGAATACAAGTTATGGAAACAGTGGTGATGGTTTCAGGGGCAGTGGAAATTATGGTGTTCCCGGTGGTGCTGGTGGCAGTAATTACCAATTCAATGAAAACTCTGGTGGCGATCTTGGCTTTGCTAGCAGTGAACTCAGTAGCAATTCTGGTTTGAGAGATGATGATGGCCAATTTGGTATCAACCAAAATGAAGGAACAGGTATAGTTGATGAAGACGACTTGCGAGATAACAATGATGAAGACAATTTGAGAGAGACCCGGCAGTGA 699 0.4392 MAFINKIGKLLKHSAVKNINLELSASTPSIYHAIRSLSSAKLFVGGVSYSTDDMGLREAFSSYGEIIDARIILDRETGRSRGFGFVTFTSSEEASAAVQAMDGSDLHGRRIRVNYATERSRPGFGGGSSGGYARSNYGGGDNYRNTSYGNSGDGFRGSGNYGVPGGAGGSNYQFNENSGGDLGFASSELSSNSGLRDDDGQFGINQNEGTGIVDEDDLRDNNDEDNLRETRQ 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3255 232 MobiDBLite consensus disorder prediction 183 232 - -
Bisa07g3255 232 FunFam Glycine-rich RNA-binding protein 3, mitochondrial 12 143 - -
Bisa07g3255 232 Gene3D - 32 180 IPR012677 -
Bisa07g3255 232 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Bisa07g3255 232 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 112 IPR000504 GO:0003723
Bisa07g3255 232 SUPERFAMILY RNA-binding domain, RBD 27 144 IPR035979 GO:0003676
Bisa07g3255 232 SMART rrm1_1 41 114 IPR000504 GO:0003723
Bisa07g3255 232 MobiDBLite consensus disorder prediction 183 208 - -
Bisa07g3255 232 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 36 198 - -
Bisa07g3255 232 CDD RRM2_NsCP33_like 41 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3255 Bisa-ChrBisa07 67481519 67483692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3255 33 126 C2H2 Transcription Factor Family AT2G19380 34.043 5.72e-12 62.8