Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3243 ATGCGCTTTCAAAATCCCGTAGTGAGGAGAGATCGACTATGGTTTCATTTCAGCGCAAACTACCCTTCGTTCCATGACCAGGAGAGTGCTGAGTGCCTCGTCCTTCCTCTGCTTCACTGTCTCCTCCATACGCAAACTCTCTATGAAATTGAAAACCCCATGGACTACACCACTGTGCCTGAATTGCAGGCCAATCCTACGCCAACGCCCCTTTGCTCTTACGCACCTGGCGTAGCCCCTTATTTTCCTCCAACCTGTCCTACCCATTACCACTCTTACCCTCAAAACCCTAACCCTTCTTCCGCAGACGCTCAATCTTCTATTGGAACTCAAGAGCTCCATGGTAGCGCCGGCCTGGAGCCTGGGATCAACCCTCCTGGTGTTGCTCCCTATGTCCCCTTGACCTCCGATTCAGCTAGCCATTTGGCTCATGAAGCCCAAGCCAATTACTCGCATGGTCACAACCCTATGGTAGATACGAGCTCGTTGGTGGCGTCTTCTGGCTACTTCTATGACCCGAATGCGCAGAATTGGGCTGCTAGGGAGGCCGTTCGGCAGTACGGGGCTGACCCGGTTGGATATGGAGCTGGCATCCTTATGCCTTCAACTGGATCAGAGCAAATGGCTATTGCAAATCAGACATGGTGGGCCAACACCATAACTCAACCTCCCGGCAATGGAACATGGAAGAAACGCCCAAAGAAAACTAAGATTGTCCAATCTGCATATTGTGAAGTTTGCAAGATAGATTGTACCAGCAAGGATGTACTCGACCAGCATAAATTAGGAAAGAGGCACAAAAAGAACTTGGACAAACTAAAAGAAGCATTAAGGCTGCCTCAAGCTCCTCCCCCTGTGTCGTCTAATCCTGTTATAGGACCTCAACTGCAGGGGGAAAAGAGCAAATCAGGTAGTAGGAAGAGTAAAAGGAAATCGATGGAAACACCAGAGGATTTGGAGAAAAAGAAAAAGAAGGTTCTTGAAGGGGGTGCAGCAGCAACAGCAGTGAAAATATGTTCTGTATGTAATGTGGTGTGTAATAGTGAGACTGTTTTCAATTATCATCTTGCAGGACAAAAGCATGCTGCTATGATGAAGAAACAAGCATCTCAACATATGCAATCAAATGCAAACTGA 1137 0.4785 MRFQNPVVRRDRLWFHFSANYPSFHDQESAECLVLPLLHCLLHTQTLYEIENPMDYTTVPELQANPTPTPLCSYAPGVAPYFPPTCPTHYHSYPQNPNPSSADAQSSIGTQELHGSAGLEPGINPPGVAPYVPLTSDSASHLAHEAQANYSHGHNPMVDTSSLVASSGYFYDPNAQNWAAREAVRQYGADPVGYGAGILMPSTGSEQMAIANQTWWANTITQPPGNGTWKKRPKKTKIVQSAYCEVCKIDCTSKDVLDQHKLGKRHKKNLDKLKEALRLPQAPPPVSSNPVIGPQLQGEKSKSGSRKSKRKSMETPEDLEKKKKKVLEGGAAATAVKICSVCNVVCNSETVFNYHLAGQKHAAMMKKQASQHMQSNAN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3243 378 Pfam Zinc-finger of C2H2 type 243 266 - -
Bisa07g3243 378 Pfam Zinc-finger of C2H2 type 338 361 - -
Bisa07g3243 378 SMART ZnF_U1_5 239 273 IPR003604 GO:0003676|GO:0008270
Bisa07g3243 378 SMART ZnF_U1_5 334 368 IPR003604 GO:0003676|GO:0008270
Bisa07g3243 378 Gene3D Classic Zinc Finger 228 273 - -
Bisa07g3243 378 Gene3D Classic Zinc Finger 306 370 - -
Bisa07g3243 378 SMART c2h2final6 337 361 IPR013087 -
Bisa07g3243 378 SMART c2h2final6 242 266 IPR013087 -
Bisa07g3243 378 SUPERFAMILY beta-beta-alpha zinc fingers 222 274 IPR036236 -
Bisa07g3243 378 PANTHER ZINC FINGER PROTEIN 385B-LIKE 91 372 - -
Bisa07g3243 378 MobiDBLite consensus disorder prediction 308 322 - -
Bisa07g3243 378 MobiDBLite consensus disorder prediction 278 322 - -
Bisa07g3243 378 SUPERFAMILY beta-beta-alpha zinc fingers 336 372 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3243 Bisa-ChrBisa07 67268455 67271885 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3243 244 373 C2H2 Transcription Factor Family AT5G61190 31.293 1.73e-07 51.6