Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3212 ATGCCCACCTTTATAAATGGGTGTGCTGCTGCTGCATTGGATGCACAGGGAACAGTGGTGAGAGGAAGGATGGAGAACGTAGACACGAGTGGAATAGCGAGGACGAAATCGGATCAGCTGGCGGAGTCAGTGGCTGCTGCTCTGAAGTCGGCGTCGTCAAGCGAATCATTCGGAATAGCGGAGGGAGGTGGAGGAGGGAGCGGAGCAACGCCGTCGGGGAGGTCGAGTCGGCGGATGACGGGGCCGTCGCCGGGGCGAAGCGGAGGAGGGAAGAACACGCACATAAGGAAGTCGAGGAGCGCTCAGTTGAAGATTGAGCTGGATGAGGTGAGCAGCGGGACGGCTCTTAGCCGAGCCTCCAGCGCCAGCTTGGGCCTCTCTTTCTCCTTCACCGGCTTCACTCTTCCTCCCGATGAAATCGCCGACTCCAAGCCCTTCAGCGACGATGATATCCCTGAGGATATTGAAACTGGGACTCACCATAAGCCGAAGCTTCAGACAGAACCCACTCTGCCCATTTATCTAAAGTTTAGGGATGTGAATTACAAGGTGTTGATCAGAGGCTTGACAACAACAGAGGAGAAAGAAATCTTAAATGGGATAACTGGTTCTGTAAATCCTGGAGAAGTTTTGGCATTGATGGGTCCTTCAGGAAGTGGAAAGACAACTCTCTTAAATCTTCTTGGAGGCAGGCTAAATCACCCCACCACCAGTGGCTCCATCACTTACAATGACCAACCATATTCGAAGTTCCTAAAGAGCAGGATAGGATTCGTGACTCAAGATGATGTTCTGTTTCCTCACCTTACTGTGAAAGAAACACTTACATACGCAGCCCTCTTAAGACTGCCCAAGACAACCACGAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTCATTCACGAGCTTGGCTTGGAGAGGTGCCAAGACACTATGATAGGAGGTTCCTTTGTTCGTGGAGTATCTGGTGGAGAGAGGAAGAGAGTTTGTATTGGGAATGAGATCATAATCAACCCTTCTCTTCTGTTTCTTGACGAACCAACTTCAGGTTTGGATTCTACAACAGCCTTGAGGATCGTCCAGATGCTACAAAACATAGCAGAGGCTGGTAAAACAGTAGTAACAACAATCCACCAACCGTCAAGCAGGCTCTTCCATAAATTTGATAAGTTGATCCTACTGGGAAAAGGAAGCTTGCTTTACTTTGGAAAAGCGTCAGAAGCAATGCTTTACTTCCAATCTATAGGGTGTTCACCCCTTATTTCCATGAACCCAGCAGAGTTTTTGTTGGACCTTGCAAATGGAAACGTAAATGATGTCTCTGTACCATCAGAGTTAGAGGATAAAGTGCATATGGAAAATGCAGAAACTGAAATCCGGAGAGGGAAACCATCACCGGCACTTGTACATGAGTATCTGGTGGAGGCGTATGAAACTCGAGTTGCAGAAACTGAAAAGAGAAGACTAATGGCTCCAATCCCTCTAGATGAAGAAGTAAAGTCTAAGATTTGCTCTCCGAAAAGACAATGGGGAGCAAACTGGTGTGAGCAATATTCCATATTGTTCTGGAGGGGAATTAAAGAACGGAGGCACGACTACTTCAGCTGGCTGACAATCACCCAAGTTCTGTCTACAGCAATCATCTTAGGATTACTTTGGTGGCAATCAGATGCTACCAGCCCAAAGGGCCTGGAAGATCAGGCAGGGTTGCTGTTCTTTATTGCTGTCTTTTGGGGATTCTTCCCCGTGTTCACTGCAATATTTACATTTCCTCAAGAGAGGGCCATGCTGATCAAGGAACGCGCAGCTGATATGTACAGACTAAGTGCTTACTTTGTGGCTAAGACGACAAGTGACCTTCCATTGGACTTGATATTACCAGTACTTTTCCTGCTCGTCGTTTATTTCATGGCTGGTTTGAGAATGAGTGCGGCCCCCTTTTTCCTCAGTATTCTTACAGTTTTCCTCTGCATCGTGGCAGCTCAGGGACTCGGACTTGCCATTGGGGCTACACTAATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTTACTGTGATGACCTTTATGCTGGCTGGAGGATTCTTTGTGAAGAAAGTCCCTATATTTATATATTGGACACGGTACATGTCATTCAACTACCATACGTATAAACTCCTACTGAAGGTGCAATATGAGCATATCTCGCCAACCATAAATGGGATCCGAATTGACAGTGGATGGACAGAGGTGGTAGCTCTGATAGCTATGATTTTTGGTTACCGTTTACTGGCATACCTTTCTTTGCGACGAATGAAGCTTCAATCTGGAGCTTGA 2316 0.4698 MPTFINGCAAAALDAQGTVVRGRMENVDTSGIARTKSDQLAESVAAALKSASSSESFGIAEGGGGGSGATPSGRSSRRMTGPSPGRSGGGKNTHIRKSRSAQLKIELDEVSSGTALSRASSASLGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIETGTHHKPKLQTEPTLPIYLKFRDVNYKVLIRGLTTTEEKEILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLNHPTTSGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAALLRLPKTTTKEQKEKRALDVIHELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQNIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMLYFQSIGCSPLISMNPAEFLLDLANGNVNDVSVPSELEDKVHMENAETEIRRGKPSPALVHEYLVEAYETRVAETEKRRLMAPIPLDEEVKSKICSPKRQWGANWCEQYSILFWRGIKERRHDYFSWLTITQVLSTAIILGLLWWQSDATSPKGLEDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLIKERAADMYRLSAYFVAKTTSDLPLDLILPVLFLLVVYFMAGLRMSAAPFFLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKKVPIFIYWTRYMSFNYHTYKLLLKVQYEHISPTINGIRIDSGWTEVVALIAMIFGYRLLAYLSLRRMKLQSGA 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3212 771 Pfam ABC transporter 198 349 IPR003439 GO:0005524
Bisa07g3212 771 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 150 759 - -
Bisa07g3212 771 Pfam ABC-2 type transporter 378 440 IPR043926 GO:0140359
Bisa07g3212 771 Pfam ABC-2 type transporter 516 725 IPR013525 GO:0016020|GO:0140359
Bisa07g3212 771 ProSitePatterns ABC transporters family signature. 321 335 IPR017871 GO:0005524|GO:0016887
Bisa07g3212 771 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 175 421 IPR003439 GO:0005524
Bisa07g3212 771 SMART AAA_5 207 398 IPR003593 GO:0016887
Bisa07g3212 771 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 410 IPR027417 -
Bisa07g3212 771 Gene3D - 174 414 IPR027417 -
Bisa07g3212 771 MobiDBLite consensus disorder prediction 55 99 - -
Bisa07g3212 771 CDD ABCG_EPDR 172 403 - -
Bisa07g3212 771 FunFam ABC transporter G family member 22 185 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3212 Bisa-ChrBisa07 66917249 66929830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3212 196 435 Calmodulin-binding Proteins AT2G36910 30.081 3.68e-17 84.7