Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3211 ATGCCAGATAGTGGTGTTAGAGGCCGTGGAGGAGAACGCCGCGAAGGACATAATTTGATGGGCAACAACTGTTTTGGACCAAACCTTGAAACGGTTTCAGCCTCTCTTAACGACCAATCGCCGGAGGGCAAGCTTCCGGCACCCAACGGCGATGACAAAAATAAAAGCGAGGACAGCGGGAACAATGCCGGCGCCGATTCATCTAAAGAATCCGACCCTTCGAAGACAGTTCAAGATACACCACCTGAACCGGTGACGATTCCCGGCCATGTAAATAAACCACCGGAACCCGATCAACCGGTTAAGCCGATGGAAGTCAATGAACCTGCCTCTAATGCTGCTGATGCCGAGAATGCCGAAAAGCCTAAGCCTGATAAGCCGGAGGTGGTCAATGAACCTGTTAAGCCGGAGGTGGTCAATCAACCTGCCTCTAGTACTACTAATGCTGGGGAAGCTAAGCAACCTGCTCAATCTCATGTTAAAAGGGTATCGAGTGTTGGACTTCGAATAGAATCGGTGTTAGGAAGGAAAACAGAGAATTTGAAGGATCTCTATAGCTTGGGACGGAAGCTTGGGCAAGGGCAATTTGGGACAACCTACCTCTGTGTAGAGAAGGCAACTAGTAAAGAGTATGCTTGTAAATCAATTGCCAAGAGAAAATTGGCCACACAAGAGGATGTGGACGATGTTAGGAGGGAGATTCAGATAATGCACCACCTGGCAGGTCACCCCAATGTGATTCAAATAGTTGGTGCTTTTGAGGACGCGGTTGCTATCCATGTTGTTATGGAGCTTTGTGCTGGTGGGGAACTTTTTGACAGGATCATACAGAGAGGGCACTACACTGAGAAAAAGGCAGCCGAGCTTGCTAGGGTAATAGTTCGTGTAGTGGAGTCATGCCATTCTATGGGGGTCATGCATCGGGACCTGAAGCCAGAGAACTTTCTGTTCGTCAGCCTGGAGGAAGAGGCACCACTTAAGACAATAGATTTTGGACTCTCGATATTCTTTAAACCAGGCGAAACATTTACGGACGTGGTTGGGAGTCCATATTATGTGGCCCCTGAAGTTTTGCGTAAGTTGTATGGTCAAGAATGTGATATATGGAGTGCAGGGGTGATCATCTATATTTTACTATGTGGAGTTCCCCCATTTTGGGATGAAACGGAGCAAGGCATATTTCAGCAAGTTTTAAAAGGAGAACTTGACTTTGTCTCTGAGCCATGGCCTAAAATATCTACAAGTGCAAAGGATCTTCTTCGAAGCATGCTTGTAAGAGACCCTAAGAAGCGGCCAACGGCAAAAGAAGTTCTTACCCATCCTTGGGTCCAGGTTGAAGGCGTTGCTCCTGATGAACCTCTTGATTCTGCTGTCTTAGGTCGTTTAAAGCAATTCTCTGCCATGAACAAGCTCAAAAAAATGGCCATCCGAGTAATTGCTGAAAGTCTGTCCGAGGATGAAATAGCAGGGCTGAAAGAAATGTTCAGGATGATAGACACAGATAATAGTGGATGTATCACTCTTGAGGAACTGAAAAATGGTCTGGAGAGAGTGGGTGCAGTTCTCAGGGATTCTGAAATTCATTGGCTAATGCAAGCGGCAGACGTTGACAATAGTGGTACGATTGACTATGGTGAATTCATAGCAGCTATGCTTCATCTAAACAAGGTCCAGCAGGAGGATCATCTATTCACAGCATTCTCCTACTTTGACAAAGATGGAAGTGGGTACATCACGCAAGATGAGCTGCAACAATCCTGCCTAAAGTTTGGTCTGGCAGATGATCAATTAGATGAGCTAATTCGCGAAGTTGACCAGGATAATGATGGACGCATTGATTACAGTGAGTTTGTTGCTATGATGCAAGACACTGAATTTGGCAAAAAGGCAATGCAGAAATAG 1902 0.4606 MPDSGVRGRGGERREGHNLMGNNCFGPNLETVSASLNDQSPEGKLPAPNGDDKNKSEDSGNNAGADSSKESDPSKTVQDTPPEPVTIPGHVNKPPEPDQPVKPMEVNEPASNAADAENAEKPKPDKPEVVNEPVKPEVVNQPASSTTNAGEAKQPAQSHVKRVSSVGLRIESVLGRKTENLKDLYSLGRKLGQGQFGTTYLCVEKATSKEYACKSIAKRKLATQEDVDDVRREIQIMHHLAGHPNVIQIVGAFEDAVAIHVVMELCAGGELFDRIIQRGHYTEKKAAELARVIVRVVESCHSMGVMHRDLKPENFLFVSLEEEAPLKTIDFGLSIFFKPGETFTDVVGSPYYVAPEVLRKLYGQECDIWSAGVIIYILLCGVPPFWDETEQGIFQQVLKGELDFVSEPWPKISTSAKDLLRSMLVRDPKKRPTAKEVLTHPWVQVEGVAPDEPLDSAVLGRLKQFSAMNKLKKMAIRVIAESLSEDEIAGLKEMFRMIDTDNSGCITLEELKNGLERVGAVLRDSEIHWLMQAADVDNSGTIDYGEFIAAMLHLNKVQQEDHLFTAFSYFDKDGSGYITQDELQQSCLKFGLADDQLDELIREVDQDNDGRIDYSEFVAMMQDTEFGKKAMQK 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3211 633 SMART efh_1 562 590 IPR002048 GO:0005509
Bisa07g3211 633 SMART efh_1 490 518 IPR002048 GO:0005509
Bisa07g3211 633 SMART efh_1 596 624 IPR002048 GO:0005509
Bisa07g3211 633 SMART efh_1 526 554 IPR002048 GO:0005509
Bisa07g3211 633 FunFam Calcium-dependent protein kinase 1 187 270 - -
Bisa07g3211 633 MobiDBLite consensus disorder prediction 1 161 - -
Bisa07g3211 633 MobiDBLite consensus disorder prediction 60 81 - -
Bisa07g3211 633 SMART serkin_6 185 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g3211 633 MobiDBLite consensus disorder prediction 87 102 - -
Bisa07g3211 633 ProSiteProfiles EF-hand calcium-binding domain profile. 592 627 IPR002048 GO:0005509
Bisa07g3211 633 PANTHER SERINE/THREONINE-PROTEIN KINASE 177 617 - -
Bisa07g3211 633 Pfam EF-hand domain pair 491 551 IPR002048 GO:0005509
Bisa07g3211 633 Pfam EF-hand domain pair 561 622 IPR002048 GO:0005509
Bisa07g3211 633 ProSiteProfiles Protein kinase domain profile. 185 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g3211 633 CDD STKc_CAMK 185 442 - -
Bisa07g3211 633 Gene3D Phosphorylase Kinase; domain 1 187 270 - -
Bisa07g3211 633 MobiDBLite consensus disorder prediction 1 16 - -
Bisa07g3211 633 MobiDBLite consensus disorder prediction 138 161 - -
Bisa07g3211 633 MobiDBLite consensus disorder prediction 118 132 - -
Bisa07g3211 633 SUPERFAMILY Protein kinase-like (PK-like) 185 444 IPR011009 -
Bisa07g3211 633 ProSiteProfiles EF-hand calcium-binding domain profile. 522 557 IPR002048 GO:0005509
Bisa07g3211 633 ProSiteProfiles EF-hand calcium-binding domain profile. 486 521 IPR002048 GO:0005509
Bisa07g3211 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Bisa07g3211 633 FunFam Calcium-dependent protein kinase SK5 271 455 - -
Bisa07g3211 633 ProSitePatterns Protein kinases ATP-binding region signature. 191 218 IPR017441 GO:0005524
Bisa07g3211 633 ProSitePatterns EF-hand calcium-binding domain. 535 547 IPR018247 -
Bisa07g3211 633 Gene3D Transferase(Phosphotransferase) domain 1 271 450 - -
Bisa07g3211 633 MobiDBLite consensus disorder prediction 24 42 - -
Bisa07g3211 633 SUPERFAMILY EF-hand 483 622 IPR011992 -
Bisa07g3211 633 ProSitePatterns EF-hand calcium-binding domain. 605 617 IPR018247 -
Bisa07g3211 633 ProSiteProfiles EF-hand calcium-binding domain profile. 558 591 IPR002048 GO:0005509
Bisa07g3211 633 FunFam Calcium-dependent protein kinase 1 451 625 - -
Bisa07g3211 633 ProSitePatterns EF-hand calcium-binding domain. 499 511 IPR018247 -
Bisa07g3211 633 Gene3D - 451 628 - -
Bisa07g3211 633 Pfam Protein kinase domain 185 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3211 Bisa-ChrBisa07 66893048 66900985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3211 20 632 EF-hand Containing Proteins AT2G38910 67.416 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa07g3211 Pkinase 4.2e-75 CL0016