Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3209 ATGTTTGGCTTCAAGAGCTTCTTGTCCCGTACTAGAAAGACAAAGAAAAAGCATAGAAATCAGCGCAAACTCAAAAGCCAATTTGCTTTCGGCAAGCAAAACCGCATTTCCCTTAAAAATGAATTGTCATGCCGAGAAGGAGAAGTAATAGAAGATAATGAAGGTTTCAAACTCAAGAGCTCTGTCCCGTCACACACATATGGTGTTCAACCTTTGGGCAACCTTTATTTCAATCCAGGTTCTATTAACTCCAGAGATACAGGTTTAGGTAACCTCCGCACTCTGACAGATGAACTCGTTCTTGATATTCTGGGGTTGTTAAGTGGCACCGACTTGGGGGTTTTGGCGACTGTGAGCAAGTCCTTTTATGTTTTTACCAACCATGAACCCATTTGGAAGAATCTTGTACTGGAAAATCTTAGTGGTGGGTTTCGGTTCAATGGGTCTTGGAAATCTACTTATATTGATGCTTACTTCCCTTCATTTGATATCTCAAAATTTTCTATTCAAAATTTGAAGGTGAGAGACTTTTATTCTGATTATCTTTTTCAAAGTTGGCTCTGTGCTAATCTTGAAATGAAACCCGAATGGCTGGTAAGAGATAATATAGTACGAAGAAATGGCATTTCAGTTGAAGAATTTATAAAGAATTTTGAGGAGCCTAATAAGCCGGTGTTGTTGGAAGGATGTCTTGATAACTGGGATGCATTGAAAAAATGGGATAGAGATTATTTGGTGCAATTGTGTGGTGATGTTAAGTTTTCAGTTGGGCCAGTAGAGATGAAGCTTGAAGACTATTTTGGGTACTCTGATCAAGTGAGAGAGGAAAGACCATTGTATTTGTTTGATCCTAAGTTTGCTGACAAAGTTCCAAATTTGGGTTCACAATATGAAGTTCCATCTTACTTCCGGGAGGACTTGTTTAGTGTCTTGGGCAAAGATAGACCTGACTACAGGTGGATTATTATTGGACCAGCTGGATCTGGATCATCTTTCCATGTTGATCCAAATTCGACTTCAGCTTGGAATGCTGTAATCAAGGGCTCCAAAAAGTGGATATTATTTCCTCCCGATGTCATTCCGCCTGGAGTTCATCCAAGCCCTGATGGGGCTGAGGTTGCATCTCCTGTTTCAATAATTGAGTGGTTCATGAACTTTTATTGTTCAACAAAAAGTTGGAAAAAGAAGCCTATTGAGTGCATATGCAAAGCTGGGGAGGTAGTCTTTGTGCCTAATGGTTGGTGGCACTTGGTGATCAACCTGGAGGAGTCCATAGCCATAACCCAAAATTATGTCAGTAGGAGGAACTTGCTAAATGTCTTGGATTTTCTTAAAAGGCCAAATGCGAGCATACTGGTATCTGGAACGAGAGATCGAGTGAACTTGTACGAGAAGTTTAAAAATACAATGGAGGATTCTTTTCCTGGAATAATTGATGAACTGACCCTAAAGGAAGAAGAGAAAAAGATCCAGCACAAGAAACTTACCTTCTGGGATTCTGTCGCAGATTCTAAAGTGGGAGCTTTCAAGTTCTCTTTCTAG 1542 0.4008 MFGFKSFLSRTRKTKKKHRNQRKLKSQFAFGKQNRISLKNELSCREGEVIEDNEGFKLKSSVPSHTYGVQPLGNLYFNPGSINSRDTGLGNLRTLTDELVLDILGLLSGTDLGVLATVSKSFYVFTNHEPIWKNLVLENLSGGFRFNGSWKSTYIDAYFPSFDISKFSIQNLKVRDFYSDYLFQSWLCANLEMKPEWLVRDNIVRRNGISVEEFIKNFEEPNKPVLLEGCLDNWDALKKWDRDYLVQLCGDVKFSVGPVEMKLEDYFGYSDQVREERPLYLFDPKFADKVPNLGSQYEVPSYFREDLFSVLGKDRPDYRWIIIGPAGSGSSFHVDPNSTSAWNAVIKGSKKWILFPPDVIPPGVHPSPDGAEVASPVSIIEWFMNFYCSTKSWKKKPIECICKAGEVVFVPNGWWHLVINLEESIAITQNYVSRRNLLNVLDFLKRPNASILVSGTRDRVNLYEKFKNTMEDSFPGIIDELTLKEEEKKIQHKKLTFWDSVADSKVGAFKFSF 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3209 513 SMART cupin_9 279 448 IPR003347 -
Bisa07g3209 513 Gene3D Cupin 160 433 - -
Bisa07g3209 513 ProSiteProfiles F-box domain profile. 89 135 IPR001810 GO:0005515
Bisa07g3209 513 FunFam F-box protein At1g78280 183 433 - -
Bisa07g3209 513 SUPERFAMILY F-box domain 87 158 IPR036047 GO:0005515
Bisa07g3209 513 ProSiteProfiles JmjC domain profile. 288 448 IPR003347 -
Bisa07g3209 513 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 89 511 - -
Bisa07g3209 513 Pfam Cupin-like domain 212 431 IPR041667 -
Bisa07g3209 513 SUPERFAMILY Clavaminate synthase-like 202 446 - -
Bisa07g3209 513 Gene3D - 85 159 - -
Bisa07g3209 513 SMART fbox_2 95 135 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3209 Bisa-ChrBisa07 66881773 66884121 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3209 80 437 Glycosyltransferase AT1G78280 37.931 4.92e-76 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bisa07g3209 Cupin_8 6.2e-24 CL0029