Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3200 ATGCTTGTGTCAAATAGGATGGAGTCTCAGGTGAAGCATGCTGTGGTTGTTAAAGTCATGGGTCGCACTGGATCCAGAGGACAGGTGACTCAGGTTAGAGTCAAGTTTTTGGATGATCATAACCGTTACATCATGAGGAATGTGAAAGGACCAGTGAGAGAAGGAGATATTCTCACCTTGCTTGAGTCTGAAAGAGAAGCTAGAAGATTGCATAGTGGATGCCAAAATGTCATTGCAGATTGTGTTGTCATGGATCTACAAGTTTTGGCCCGTGACAGCTTCAAAGCTTCGCCGCCATTTCTCTGTGTCTCGGTATCTTTGAGAAGCACAACCATGGATGCTGCTACTGCTGCTGCGGTTCCAGTTCCTACTGAAGCTCCGAAGATTCTTGATCCTACCCAGATCGAGGTGAAGCTCTTCAATAGGTGGACCTTTGATGACGTTCAGGTTATTGACATCTCTCTGGCTGATTATATTGGAGTGGCACCATCCAAGCATGCAACATATGTTCCTCACACTGCTGGTAGGTACTCAGTCAAGCGATTCAGGAAAGCCCAGTGTCCCATAGTTGAGAGGCTTACTAATTCTCTCATGATGCACGGTAGAAACAATGGGAAGAAACTAATGGCTGTGAGAATTGTCAAGCATGCCATGGAAATTATTCATCTGTTGACTGACCAGAACCCCATTCAAGTTATTGTTGATGCTGTGATTAACAGTGGTCCCCGTGAAGATGCAACTAGAATTGGTTCTGCTGGAGTTGTTAGGAGACAAGCTGTTGATATCTCACCCCTTCGCCGTGTTAATCAGGCCATCTATCTTCTAACTACTGGTGCACGTGAAGCTGCTTTCAGAAATATTAAGACAATTGCTGAATGCTTGGCTGATGAACTTATCAATGCAGCAAAGGGCTCATCCAACAGCTATGCTATCAAGAAAAAGGATGAGATTGAGAGAGTTGCGAAGGCAAATCGTTAA 978 0.4468 MLVSNRMESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDHNRYIMRNVKGPVREGDILTLLESEREARRLHSGCQNVIADCVVMDLQVLARDSFKASPPFLCVSVSLRSTTMDAATAAAVPVPTEAPKILDPTQIEVKLFNRWTFDDVQVIDISLADYIGVAPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3200 325 NCBIfam 30S ribosomal protein S7 136 325 IPR005716 GO:0003735|GO:0006412|GO:0015935
Bisa07g3200 325 Pfam Ribosomal protein S28e 10 70 IPR000289 GO:0003735|GO:0005840|GO:0006412
Bisa07g3200 325 Gene3D Ribosomal protein S7 domain 119 325 IPR036823 -
Bisa07g3200 325 FunFam 40S ribosomal protein S5 122 325 - -
Bisa07g3200 325 CDD uS7_Eukaryote 138 325 IPR005716 GO:0003735|GO:0006412|GO:0015935
Bisa07g3200 325 FunFam 40S ribosomal protein S28 4 71 - -
Bisa07g3200 325 ProSitePatterns Ribosomal protein S28e signature. 62 70 IPR028626 -
Bisa07g3200 325 PANTHER RIBOSOMAL PROTEIN S7 122 325 IPR000235 GO:0006412
Bisa07g3200 325 Pfam Ribosomal protein S7p/S5e 179 325 IPR023798 -
Bisa07g3200 325 Hamap 30S ribosomal protein S28e [rps28e]. 7 71 IPR000289 GO:0003735|GO:0005840|GO:0006412
Bisa07g3200 325 Gene3D - 5 71 IPR012340 -
Bisa07g3200 325 SUPERFAMILY Nucleic acid-binding proteins 7 71 IPR012340 -
Bisa07g3200 325 CDD S1_S28E 12 70 IPR000289 GO:0003735|GO:0005840|GO:0006412
Bisa07g3200 325 ProSitePatterns Ribosomal protein S7 signature. 191 217 IPR020606 GO:0003723|GO:0003735|GO:0006412
Bisa07g3200 325 SUPERFAMILY Ribosomal protein S7 138 325 IPR036823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3200 Bisa-ChrBisa07 66803359 66809445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3200 136 325 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 93.684 2.56e-133 376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g3200 07 66803359 66809445 Bisa07g3200 07 66803359 66809445 ECH