Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3198 ATGTTGGATGACTTCTTAGCTCAGGCTTTTGCTTTGGCTAATAAGGATGCCAAAAAGAAGATGAGTAGTAGCAATGCTAAAGCCTTTAACTCAATGAAGCAGAAGTTAAAAAAGAATAATAAGCAATATGAGGATTTGATTAAGAGTGAGGAGGAGAAAGCTGAAGAGGAAAGTGAGGAGGAGGTAATTAAGGGGCTTGATAAGATTCAGAAGTCAGATTTTGAAGATGGTGATCAAGAAGATGAGAAGTCAGATGCAACTGATACATCTTGGGACCAAAAACTTAGCAAGAAAGACGGACTCATGGTTAGGCAATTTATGAAGGACCCAGGTGAGATCACTTGGGAAATGGTTAACAAGAAGTTCAAAGAGGTGGTGGCAGCTCGGGGCAGGAGGGGGACTGGAAGGTTTGAACAGGTTGAGCTGCTAACCTTCTTAACTAAAGTTGCTAAAACGCCTGCACAGAAGCTGAAAATCTTTTTCGGTGTTGTTTCTGCTCAATTTAATGTTAATCCGGGTTTAAATGGGCATATGCCTGTAAATGTGTGGAAGAAATGCGTTCAGAACATGTTGGTCATTCTTGATATTCTAGTGCAGTACCCGAACATAGTTGTTGATGATACACTAGAGCCTGATGAGAATGAAACTCAGAAAGGGTCTGACTCTAATGGACCGATTCGGGTATCGGGGAACTTAGTTGCATTCCTGGAGCGAATAGATGCTGAATTTTTTAAGAGCTTGCTATACATTGATCCTCATACTCGTGAGTATGTTGAGAGACTCAGGGATGAGCCCGTGTTTCTGGCTCTTGCTCAGAAAGTCCAGGACTATCTTGAAAGGGTTGGAGATTTCAAAGGTTCTTCCAAGGTGGCCCTTAGACTAGTTGAACTCGTCTATTACAAGCCCCAAGAGGTTTACAATGCCATGAGAAAATTCGCTGAACTGACAGAAGACGGAGATGGGGAGGTAGATGAGGATTCTAGAGGGTTTCAGGAGACAAAGGTTCCTACTGCATTTATTGTTACTCCTGAGCTCGTGCCCCGAAAACCCACCTTTCCTGAGAATAGTAGGACACTAATGGATTTATTGGTGTCCCTGATATACAAGTATGGGGATAAAAGGACCATGGCACGTGCAATGCTTTGTCTATGTGCTTTTCGCGTTGGACTGATTTCTGAATCTCATGGCTGTCTCTCTGAACTCTATTCTGGTGGAAAGCTGAAGGAGCTACTTGCGCAGGGTGTGTCACAAAGTCGCTATCATGAGAAGACTCCAGAACAGGAAAGGTTTGAAAGGAGACGCCAGATGCCATATCACATGCACATAAACCTGGAGCTCCTGGAGGCGGTGCATCTTATATGTGCTATGCTTCTGGAAGTCCCTAATATGGCTGCTAATGTCCATGATGCAAAGCGCAAGGTTATTAGTAAGACTTTCCGTCGGCTGGTTGAGGTAAGTGAGAAGCAAACATTTGAAGTTCCACCTGAAAGTATCAGAGATCATGTTATGGCTGCTACAAGGGCCCTCAGCAAGGGAGACTTCCAAAAGTCTTTCAACATCATCAAGTCTTTGCATGTCTGGAAAGTCGTCAAAAATCATGATAAGGTGCTTGAAATGCTGAAGGAAAAAATTAAGGAGGAGGCGTTAAGGACCTACCTGTTTACCTTCTCATCATCCTATGATTCTATGAGCCTTGAGCAGCTTCGGAAAATGTTTGGCCTCTCTGTTGCTCACACCCATAGCTTTGTTAGTGGGATGATGATCAGCGAAGAGCTCCAAGCAAAGCTTGGACCAGCCAACCGGGTGCATTTTTTTCCAGGATGTGGAGCACTCCAGGTTGCAGGCGCTGGCATTTCAGGTGACAGAGAAGATATCTTTCCTTGCTGA 1887 0.4404 MLDDFLAQAFALANKDAKKKMSSSNAKAFNSMKQKLKKNNKQYEDLIKSEEEKAEEESEEEVIKGLDKIQKSDFEDGDQEDEKSDATDTSWDQKLSKKDGLMVRQFMKDPGEITWEMVNKKFKEVVAARGRRGTGRFEQVELLTFLTKVAKTPAQKLKIFFGVVSAQFNVNPGLNGHMPVNVWKKCVQNMLVILDILVQYPNIVVDDTLEPDENETQKGSDSNGPIRVSGNLVAFLERIDAEFFKSLLYIDPHTREYVERLRDEPVFLALAQKVQDYLERVGDFKGSSKVALRLVELVYYKPQEVYNAMRKFAELTEDGDGEVDEDSRGFQETKVPTAFIVTPELVPRKPTFPENSRTLMDLLVSLIYKYGDKRTMARAMLCLCAFRVGLISESHGCLSELYSGGKLKELLAQGVSQSRYHEKTPEQERFERRRQMPYHMHINLELLEAVHLICAMLLEVPNMAANVHDAKRKVISKTFRRLVEVSEKQTFEVPPESIRDHVMAATRALSKGDFQKSFNIIKSLHVWKVVKNHDKVLEMLKEKIKEEALRTYLFTFSSSYDSMSLEQLRKMFGLSVAHTHSFVSGMMISEELQAKLGPANRVHFFPGCGALQVAGAGISGDREDIFPC 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3198 628 Coils Coil 26 60 - -
Bisa07g3198 628 Coils Coil 530 550 - -
Bisa07g3198 628 SUPERFAMILY "Winged helix" DNA-binding domain 535 601 IPR036390 -
Bisa07g3198 628 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 383 470 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bisa07g3198 628 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 1 382 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bisa07g3198 628 MobiDBLite consensus disorder prediction 59 77 - -
Bisa07g3198 628 ProSiteProfiles PCI domain profile. 438 610 IPR000717 -
Bisa07g3198 628 Pfam PCI domain 480 602 IPR000717 -
Bisa07g3198 628 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 382 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bisa07g3198 628 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 539 617 IPR000717 -
Bisa07g3198 628 MobiDBLite consensus disorder prediction 40 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3198 Bisa-ChrBisa07 66767917 66770801 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3198 1 605 Eukaryotic Initiation Factors Gene Family AT3G56150 62.105 0.0 768