Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3196 ATGGCTTCAAGATTCTGGACCCAGGGCGGTAGTGACTCTGAGGAGGAGGAGAGTGACTATGATGAAGACGTTGAGAATGCAGTGGGTGAATCTGCCAATCAAACTGTTAAAAGCAGATACTTGCAGGGTAATGCCAGCGATAGTGATGACTCTGACGGCCAAAAGCGTGTGGTTAGGTCAGCCAAAGACAAAAGATTTGAAGAGATGTCATCTACTATTGATCAGATGAAGAATGCTATGAAGATTAATGACTGGGTGAGCTTGCAAGAGAGCTTCGATAAGATAAACAAACAACTTGAGAAGGTCATGCGTGTCACTGAATCTGAGAAGGTTCCTACACTTTACATTAAGGCACTTGTGATGTTGGAAGACTTCTTGGCTCAGGCTTTGGCTAATAAGGATGCCAAAAAGAAGATGAGTAGTAGCAATGCTAAAGCTTTGAACTCAATGAAGCAGAAGTTGAAAAAGAATAATAAGCAATACGAGGATTTGATTAATAAATATAGAGAAAATCCTGAGAGTGAGGAGGAGAAAGATGAAGAGGAGACTGAGGATGAGGATGAAAGTGAGGAGGAGGTCATTGAGGAGCTTGATAAAATTCAGAAGTCAGATTCTGAAGATGGTGATCAAGAAGATGAGAAGTCAGATGCAATTGACACACCTTGGGACCAAAAACTTAGCAAGAAAGACAGACTTATGGATCGGCAATTTATGAAAGACCCTAGTGAGATCACTTGGGAAATGGTTAACAAGAAGTTCAAAGAGGTGGTGGCAGCTCGGGGTAGGAGGGGGACTGGAAGGTTTGAACAGGTTGAGCAGCTAACTTTCCTAACTAAAGTTGCTAAAACTCCTGCTCAGAAGCTGGAAATCTTTTTCAGTGTTGTTTCTGCTCAATTTGATGTTAATCCGGGTTTAAATGGGCATATGCCTATAAATGTGTGGAAGAAATGCGTACATAACATGTTTGTGATTCTTGATATTCTAGTGCAGCACTCGAACATAGTTGTTGATGATACAGTGGAGCCTGATGAAAATGAAACTCAGAAAGGGTCTGATTATAATGGACCAATTCGTGTATGGGGGAACTTAGTTGCATTCTTGGAGAGAATAGATGCTGAGTTTTTTAAGAGCTTGCAATGCATTGATCCTCATACTCGTGAGTATGTTGAGAGACTTAGGGATGAGCCCCTGTTTCTGGCCCTTGCTCAGAATGTGCAGGACTATCTTGGAAGGGTTGGAGATTTCAAAGCTTCTTCCAAGGTGGCCCTTAGACGGGTTGAACTCGTCTATTACAAGCCCCAAGAGGTTTATGATGCCATGAGGAAATTGGCTGAACTGACAGAAGATGGAGATATTGGGGAGGCAGAGGAATCTAGAGGGTTTGAGGAGACGAGGATTCCTACTGCATTTGTTGTTACTCCTGAGCTCGTTCCCCGAAAACCCACCTTTCCTGAGAATAGCAGGACACTGATGGATTTATTGGTGTCCCTGATATACAAGTATGGGGATGAGAGTACTAAGGCACGTGCAATGCTTTGTGATATATATCACCACGCTCTTCTGGATGAATTCTCAACAGCACGTGATCTGCTGCTTATGAGCCATTTGCAAGATAGTGTTCAGCATATGGACATATCAACACAGATACTTTTTAACAGGGCTATGGCACAACTAGGTCTATGTGCTTTTCGTGTTGGACTGATTCCTGAAGCTCATGGTTGTCTCTCTGAACTTTATTCAGGCGGAAGGGTGAAGGAGCTACTGGCACAGGGCGTGTCACAAAGTCGCTATCATGAGAAGACTCCAGAACAGGAAAGGTTGGAAAGGAGACGCCAGATGCCATATCATATGCATATAAACCTTGAGCTCCTGGAGTCAGTGCATCTTATATGTGCTATGCTTCTGGAAGTTCCTAATATGGCTGCTAACGTCCATGATGCAAAGCGCAAGGTTATCAGTAAGACTTTCCGTCGGCTGCTTGAGGTTAGTGAGAAGCAAACATTCACAGGTCCACCTGAAAATGTGAGAGATCATGTCATGGCTGCTACAAGGGCCCTTAGTAAGGGGGACTTCCAAAAGACCTTTGACGTAATCAAGTCTTTGGATGTCTGGAAATTTGTTAGAAACCGTGACAATGTACTTGAAATGCTCAAGGGAAAAATCAAGGAGGAGGCATTAAGGACATACCTGTTTACCTTCTCTTCATCCTATGAGTCTTTGAGCCTTGAGCAGCTCACCAAGATGTTTGACCTCTCTGTTGCTCACACCCACAGTATCGTTAGTCGCATGATGATTAATGAGGAGCTGCATGCAAGCTGGGACCAGCCAACCGGGTGCATTATTTTCCAGGATGTTGAGTACTCTAAGTTGCAGGCTCTGGCATTCCAATTGACAGAAAAGTTATCTATTCTTGCAGACAGTAATGAAAGAGCAATAGAGGCAAGGATAGGCGGTGGTGGATTGGATCTGCATCTCAGGCGACGGGATAACCAGGACTATGCTGCTGCTGCAACAGCTACTGGAGGTAGTAGGTGGCAAGACTTGTCCCTTACTCAAACAAGGCAAGGCAGTGGCACTGGACGTGCAGGATATAGTATTGGTGGTGGAAGGCCATTGGCAATGGGCCAAAACACTGGGAGTTGGTATTCAAGGGACCGAACAGGAAGAGGAACTGGTGGGGGCTACCAAAGTACAAGATATCAGGACTCTGCCTATGGTGGTTCAGGGAGGACCCAGGGTGGATCAGCACTGAGAGGAGCCCAGGTGGATGCCTCTACTCGAATGGTCAGCCTTAAGGGAGTTCGTGCTTAA 2811 0.4479 MASRFWTQGGSDSEEEESDYDEDVENAVGESANQTVKSRYLQGNASDSDDSDGQKRVVRSAKDKRFEEMSSTIDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPTLYIKALVMLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLINKYRENPESEEEKDEEETEDEDESEEEVIEELDKIQKSDSEDGDQEDEKSDAIDTPWDQKLSKKDRLMDRQFMKDPSEITWEMVNKKFKEVVAARGRRGTGRFEQVEQLTFLTKVAKTPAQKLEIFFSVVSAQFDVNPGLNGHMPINVWKKCVHNMFVILDILVQHSNIVVDDTVEPDENETQKGSDYNGPIRVWGNLVAFLERIDAEFFKSLQCIDPHTREYVERLRDEPLFLALAQNVQDYLGRVGDFKASSKVALRRVELVYYKPQEVYDAMRKLAELTEDGDIGEAEESRGFEETRIPTAFVVTPELVPRKPTFPENSRTLMDLLVSLIYKYGDESTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDSVQHMDISTQILFNRAMAQLGLCAFRVGLIPEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLESVHLICAMLLEVPNMAANVHDAKRKVISKTFRRLLEVSEKQTFTGPPENVRDHVMAATRALSKGDFQKTFDVIKSLDVWKFVRNRDNVLEMLKGKIKEEALRTYLFTFSSSYESLSLEQLTKMFDLSVAHTHSIVSRMMINEELHASWDQPTGCIIFQDVEYSKLQALAFQLTEKLSILADSNERAIEARIGGGGLDLHLRRRDNQDYAAAATATGGSRWQDLSLTQTRQGSGTGRAGYSIGGGRPLAMGQNTGSWYSRDRTGRGTGGGYQSTRYQDSAYGGSGRTQGGSALRGAQVDASTRMVSLKGVRA 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3196 936 Gene3D - 726 791 IPR036388 -
Bisa07g3196 936 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 931 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bisa07g3196 936 MobiDBLite consensus disorder prediction 49 68 - -
Bisa07g3196 936 Coils Coil 144 171 - -
Bisa07g3196 936 MobiDBLite consensus disorder prediction 134 225 - -
Bisa07g3196 936 MobiDBLite consensus disorder prediction 876 919 - -
Bisa07g3196 936 MobiDBLite consensus disorder prediction 28 48 - -
Bisa07g3196 936 ProSiteProfiles PCI domain profile. 615 787 IPR000717 -
Bisa07g3196 936 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 46 647 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bisa07g3196 936 MobiDBLite consensus disorder prediction 1 68 - -
Bisa07g3196 936 SUPERFAMILY "Winged helix" DNA-binding domain 712 786 IPR036390 -
Bisa07g3196 936 Pfam PCI domain 655 783 IPR000717 -
Bisa07g3196 936 MobiDBLite consensus disorder prediction 875 921 - -
Bisa07g3196 936 MobiDBLite consensus disorder prediction 135 154 - -
Bisa07g3196 936 MobiDBLite consensus disorder prediction 155 174 - -
Bisa07g3196 936 MobiDBLite consensus disorder prediction 12 26 - -
Bisa07g3196 936 MobiDBLite consensus disorder prediction 175 194 - -
Bisa07g3196 936 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 2 860 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bisa07g3196 936 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 716 804 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3196 Bisa-ChrBisa07 66744998 66748736 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3196 1 936 Eukaryotic Initiation Factors Gene Family AT3G56150 69.777 0.0 1234