Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3178 ATGAACGTAGACTCTTTCTCTCAGCTTCCCTTCATCCGCCCTCCCCCTCTCAAAGACAAGCCCATCAAGCTCTTCGGCATCGAATTCCCCACCTCCGACCCAAACAACTCCACCGACTCACCTGATGATTCCACCTCCAAGGACGCCGGCGCCGCCTCCGCCGCGACGGACAACGGGGAGACCAACCGGAGATTCGAATGCCATTACTGCTGCAGAAACTTCCCCACCTCCCAGGCCTTAGGTGGCCACCAAAACGCCCACAAACGAGAGCGCCAACACGCCAAACGGGCCCACCTCCACTCCGAGGCTCAACTCTACGGCCTCGTCAACTACAGGCCCTTCTCCTTCTCTTCCCCTCCGCCTCCGTCTAATGCCATCGCCGGAGCAAGGTTTTACGGAACCCCCTATTCTTCTTCTCATCATCATCAACACCACGGCGCCATCAACGGAAGTCCCTTGGCCTTGTGGCGAATCCCCGCTAGTACTCTCCAATCCGACCCTAATTATCACCACCGTGACCCATCCTTGCTCGCCGCCGACCAAGTAAACGCCAGGGCCTCGTCGTTGCAGCTTCGTGGGGCCGCTGCTTCCCAATTACAAAACCGGTACGTCTATAATGATTCCAAACCCAGCCTCCAGGACCACGTCAGCTTGGATCTTCATCTGTAA 669 0.574 MNVDSFSQLPFIRPPPLKDKPIKLFGIEFPTSDPNNSTDSPDDSTSKDAGAASAATDNGETNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLHSEAQLYGLVNYRPFSFSSPPPPSNAIAGARFYGTPYSSSHHHQHHGAINGSPLALWRIPASTLQSDPNYHHRDPSLLAADQVNARASSLQLRGAAASQLQNRYVYNDSKPSLQDHVSLDLHL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3178 222 PANTHER ZINC FINGER PROTEIN GIS 1 222 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Bisa07g3178 222 MobiDBLite consensus disorder prediction 1 58 - -
Bisa07g3178 222 SUPERFAMILY beta-beta-alpha zinc fingers 62 93 IPR036236 -
Bisa07g3178 222 MobiDBLite consensus disorder prediction 30 58 - -
Bisa07g3178 222 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 92 IPR013087 -
Bisa07g3178 222 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Bisa07g3178 222 Gene3D Classic Zinc Finger 42 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3178 Bisa-ChrBisa07 66526149 66526817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3178 1 222 C2H2 Transcription Factor Family AT2G41940 37.838 1.21e-38 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2242 03 32554317 32555078 Bisa07g3178 07 66526149 66526817 CCT
Bisa07g3178 07 66526149 66526817 Bisa07g3178 07 66526149 66526817 ECH