Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3141 ATGAGTCGTGGAGGAGCAGAACAGCCACCATACGTGGACTCTGCAAAACCATCTATCATCACCATTATGAGTGGCTTCGAATCACCCGCTTCAGCTTTCTATGCAACAGAGCGATGCATGGGGTTTCAACAACAACATCACTCCCAGGTTAATGATGATAACAACAATCATCCTCATCCCTCTTTGAGTTCTCCTTTTTCTAAGATTCACGATTTGGAACTCCCTCTGTATGAATCTCCCAGAGAAAGCCCTTTCTTGGATCATTCACCACACCAAGCTGACTCCAATGTGGAATTATCAAATACCTTGCAAGCAATGGTGAAATCCCCATGGAATACTAATCAGTTCTGTGGATCTCCACAACAACCCAATAAAATCCCATGTGGGGATCTCCCAGTCAGCAAGTTTCTACCAACTGAACCACACAAGGTGTTCAGTATTGATGATGCTGCATCAGTTAGAAGGAATCATACAGTTGGTTTTGGCTCATACAATTTACCTGTTTCTCATGTAAGCTTCTCTTCTCAGCAAGAGAAGCTGTCTCCAACAGTTTCAACCCCTGGAAATCCTACTTCTAGTGGTAATGGGACAGTAATCTCGAGTAAAACTCGTATAAGATGGAATCAGGATCTTCACGAGAAGTTTGTCGAGAGTGTGAATCGTCTCGGGGGTGCTGAGAAGGCAACACCAAAAGCTATTCTAAAACTGATGGACTCAGATGGGTTGACCATCTTCCATGTAAAGAGTCATTTGCAGAAATACAGAATTGCAAAGTACATGCCAGACCAAGCTCAAGTGAAGTCTGACAAAGGAACCCATATAGAGGACGTGCAACATATTGACGCCAAAACTAGCTTGCAAATTAGAGAGGCACTTCAGCTACAGCTAGATGTTCAGAGGCGTCTCCATGAACAGCTAGAGATTCAGAGAAAATTACAGGTTCGAATTGAAGAACAGGGAAAGCAGCTGAAGATGATGTTTGACCAACAGCAGAAGACAAGTAACAGCCTGTTGAGTACCCAGAATTTGGATTGCACAGTACCCGATGACGATGCATCAACATGGAGACATGTGGAGACATTTGGTTATATTATAGAATTAATTAACCCTATTGGAAATGCAGACCCAAAGGAAGAAGGAGGCGTCGGCGGCAAGAAACTAGAAAGAACAGAGCTGGAAAGCTTACGTGGTTGGTGTAATAAGGCCAAGGCAAGTGGGAAGATTCTCTTTGCACCTTTTCAAGAGATTAGAAGTGGTAGGCCCTCGGTAGAGTGA 1275 0.4369 MSRGGAEQPPYVDSAKPSIITIMSGFESPASAFYATERCMGFQQQHHSQVNDDNNNHPHPSLSSPFSKIHDLELPLYESPRESPFLDHSPHQADSNVELSNTLQAMVKSPWNTNQFCGSPQQPNKIPCGDLPVSKFLPTEPHKVFSIDDAASVRRNHTVGFGSYNLPVSHVSFSSQQEKLSPTVSTPGNPTSSGNGTVISSKTRIRWNQDLHEKFVESVNRLGGAEKATPKAILKLMDSDGLTIFHVKSHLQKYRIAKYMPDQAQVKSDKGTHIEDVQHIDAKTSLQIREALQLQLDVQRRLHEQLEIQRKLQVRIEEQGKQLKMMFDQQQKTSNSLLSTQNLDCTVPDDDASTWRHVETFGYIIELINPIGNADPKEEGGVGGKKLERTELESLRGWCNKAKASGKILFAPFQEIRSGRPSVE 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3141 424 Gene3D - 201 260 - -
Bisa07g3141 424 MobiDBLite consensus disorder prediction 178 198 - -
Bisa07g3141 424 NCBIfam myb-like DNA-binding domain, SHAQKYF class 202 257 IPR006447 GO:0003677
Bisa07g3141 424 SUPERFAMILY Homeodomain-like 200 256 IPR009057 -
Bisa07g3141 424 Pfam MYB-CC type transfactor, LHEQLE motif 286 333 IPR025756 -
Bisa07g3141 424 Coils Coil 289 309 - -
Bisa07g3141 424 MobiDBLite consensus disorder prediction 44 65 - -
Bisa07g3141 424 FunFam Myb family transcription factor 201 259 - -
Bisa07g3141 424 MobiDBLite consensus disorder prediction 44 63 - -
Bisa07g3141 424 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 189 336 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3141 Bisa-ChrBisa07 65987355 65992188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3141 196 332 G2-like Transcription Factor Family AT3G04450 56.643 2.66e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa07g3141 Myb_CC_LHEQLE 1.6e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g3141 07 65987355 65992188 Bisa07g3141 07 65987355 65992188 ECH