Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3138 ATGATACACTTGCGGAGGCTTAGATTAACTTCCATTCTCCAACGGGCTACTTCCGATTTTGCTGAAAATCGTCTTAAGTCATCAAAGAACCCACTTTGGCTTGTTGGGTTGTCCTGCATTGTCCAAAACCCTAGATTGTACAGAACTACAGGGGCAGTTCAGTCTTCCCGTATTAAAGATCTTGAAGTGGATTTGGCTGCTGTCGGTCGCACCATTCGAGAGGCCCGAGAAGAAGCCAAAGCTGCGTTACTGGATTATCTACATTCCACTAGAAGCATCCAGTACCTGGATGCAGATAATATGTGTAGAAACTCACCTTGTTTTCTTGAGGAGCTTCTGAAGAAAGTTGAAAAGCAGAAGGACATCAGGCGGTCAGTTTCCCGGTATTTGCGTTACCATCCCATCAATGAATTTGAACCCTTCTTCGAAAGCATAGGTTTGAAACCTTCCGAATATGTGTCTCTTCTACCGAAAAATCTGATTTTCTTGATTGATGACCAACTGTTGCTGCAGAACTATTACGCCCTTTGTAAATTTGGGATTCCACGTAATAAGATGGGAAAGATTTATAAGGAAGCGCCGGAAGTGTTTCGCTATGATTATGGGGTTTTACCGTCTAAGCTTAAAGCTTATGAAAAACTGGGTCTTGGCCAGTCTACACTAATAAAAGTTATTACTTCTAGCCCATACCTTTTGATTGGGGATTGTAATATTGATTTGATCAAGATTATAGAGAAACTGAAGCATTATGTGAATGATATTAATTGGGTTGAGGGATGTTTATTGGATGGGACTACTTATAATTGGAGCCAGATGCTTGAGCTCTTGTGCTTGCTTGGCAAGGTTTTGAGTGAGCAACAGTTGGCTGACATTATTAACCAGCAACCTAACCTTCTTTTTGAGGAGTCAGGAGGTAGGACAATCTCCCTTATTTGTTTCCTTGTAAAATTGGGATTGTCAACGAATCAAGTATCCCTCATATTTCTAGAGTTTCCACAAATTCAAGTGGGCAAATTCCTTTCGAATTTGAATCATTGTTTTCTATTCCTAAGTGAAATTGACATGGAGGCTGCGGAGATTGGAAAGATTTTCCGCTCTCACTCCTTGTCATTGGGTTCATTCACTTTGAAGAGAACAAATAGTTTACTTTCTAACTTGAGTGCTGGCAAGAAGCGACTTCGGATGGTCATACAGGATAATCCTCTAGTATTGAAGAATTGGGCTGTGGGAAGAAGAGTTCAGCGTTTGCAAAATACAGAGGAAAAGCAATCCCGGATGCGGAAGATAGAGTTCTTGTTGAGCTTGGGATATGAAGAGGGCTCGAAAAAATGGAAACAAGCATTTAAGGTGTTCAGAGGTAGGGGAACAGAACTCCAAGAGAGGTTCGATTGTATTGTTAAAGCTGGCTTGGATTGTCGGGATGTGCAGGGAATGGTTAAAGTTGCCCCTAAGATTCTTAACCTCTCTACAGATTATATCAACTTGAAAATTGACTATCTTGTAAATGAACTAGGATATCCCTTATCAACTTTAGTGAGCTTCCCATCATTTCTTTCCTACAAACGTGAAAGAATCGAGCTTAGGTTGTCAATGTATAAATGGCTTTTAGACAACGGAACTGTCATTCCCAAGCTTGCTTTGAGCACTATAGTTGCATGCACAGAGAAAGAATTCGTACAACTATATGTAAATCAACATCCAAGTGGCCCCGAAGTTTGGCAGGATTTGAAGAATAAATTTTTTTCACAGAATTAA 1755 0.404 MIHLRRLRLTSILQRATSDFAENRLKSSKNPLWLVGLSCIVQNPRLYRTTGAVQSSRIKDLEVDLAAVGRTIREAREEAKAALLDYLHSTRSIQYLDADNMCRNSPCFLEELLKKVEKQKDIRRSVSRYLRYHPINEFEPFFESIGLKPSEYVSLLPKNLIFLIDDQLLLQNYYALCKFGIPRNKMGKIYKEAPEVFRYDYGVLPSKLKAYEKLGLGQSTLIKVITSSPYLLIGDCNIDLIKIIEKLKHYVNDINWVEGCLLDGTTYNWSQMLELLCLLGKVLSEQQLADIINQQPNLLFEESGGRTISLICFLVKLGLSTNQVSLIFLEFPQIQVGKFLSNLNHCFLFLSEIDMEAAEIGKIFRSHSLSLGSFTLKRTNSLLSNLSAGKKRLRMVIQDNPLVLKNWAVGRRVQRLQNTEEKQSRMRKIEFLLSLGYEEGSKKWKQAFKVFRGRGTELQERFDCIVKAGLDCRDVQGMVKVAPKILNLSTDYINLKIDYLVNELGYPLSTLVSFPSFLSYKRERIELRLSMYKWLLDNGTVIPKLALSTIVACTEKEFVQLYVNQHPSGPEVWQDLKNKFFSQN 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3138 584 Pfam mTERF 283 438 IPR003690 GO:0003690|GO:0006355
Bisa07g3138 584 Pfam mTERF 457 558 IPR003690 GO:0003690|GO:0006355
Bisa07g3138 584 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Bisa07g3138 584 SMART mt_12 222 257 IPR003690 GO:0003690|GO:0006355
Bisa07g3138 584 SMART mt_12 476 507 IPR003690 GO:0003690|GO:0006355
Bisa07g3138 584 SMART mt_12 508 539 IPR003690 GO:0003690|GO:0006355
Bisa07g3138 584 SMART mt_12 325 356 IPR003690 GO:0003690|GO:0006355
Bisa07g3138 584 SMART mt_12 187 217 IPR003690 GO:0003690|GO:0006355
Bisa07g3138 584 Gene3D Transcription termination factor 3, mitochondrial 308 576 IPR038538 -
Bisa07g3138 584 PANTHER CGI-12 PROTEIN-RELATED 81 237 IPR003690 GO:0003690|GO:0006355
Bisa07g3138 584 FunFam Transcription termination factor MTEF18, mitochondrial 310 576 - -
Bisa07g3138 584 FunFam mTERF family protein 115 263 - -
Bisa07g3138 584 Coils Coil 58 78 - -
Bisa07g3138 584 Gene3D Transcription termination factor 3, mitochondrial 108 307 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3138 Bisa-ChrBisa07 65962008 65963762 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bisa07g3138 mTERF 8.7e-09 No_clan