Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3136 ATGGGTTCAAGCTCTGTGACTGAAGCGGCTGCCGCCTCCAACTCCTCCACCGAGTCCCTAAATGGGTTGAAATTCGGGCAGAAGATATACTTTGAAGATGTGGGGGTGGGAGCTCCGGCGAAATCCGGCGGTGGGGCGTCGTCTTCGTCCTCCGGGGCAACACCGCCTAAGAAGGGAAGGGGATGTGGGGTTCAGGGGGCTCAGCCTCCAAGGTGTCAGGTGGAGGGCTGCAAAGTAGATCTGAGTGATGCCAAGGCTTACTATTCTAGACATAAAGTCTGTAGCATGCACTCCAAATCACCTAGGGTCGTTGTCGCTGGACAGGAGCAAAGGTTTTGCCAACAGTGCAGCAGATTCCATCAGCTTTCAGAGTTCGACCAAGTAAAACGAAGTTGTCGGAGGCGACTGGCAGGCCATAATGAACGTAGGAGAAAGCCTCCACCCAGTTCGCTATTGGCGTCTCGATATGGCCGACTGACTCCAGCTAATTTCGATAGCAGTAGCAGAGGTGGTGGAATTCTGATGGAATTTGCCACATATCCAAAGCTTAGTCTGAGAAATCCAATGCCGACTCCTTCATCATCCGAGCAGCTTCCTGGGAACCCAAGCGTGACACTGCCATGGGAGGGCAATTCTGAGACCACTCCTCCATCCCTGCTTTTCTTGCAAGCAGGTTGTTCTTCGGTGGGTGGGACGAGTTACTCTGGTTCCAGAAATTCTTCCTCAGGGGAAAGCTTTGCTGGTGTGACAGACTCAAGCTGTGCTCTCTCTCTTCTGTCAAACCAAGCCTGGGCCCCACGAAACAGAGCTCCAAGTCTTGGTATGAATAACTTTATGAGCTTTGACGACACACCCATCACGCAACTTGCTGCCGCATCATCTCATTCTCATCATGGACATGGCCCATCCATCCATCATCAGCTTTCAAATGCCCCCTGGTGCTTCAAGGGCATTGATGCCGCTGCTAACTGTTCTCATGAAATTGCCCCTGATCTTGGCCTGGGTCATCAAATCTCGCACCCTATCACTGGCCCACTTCCGGGGGAGCTTGACGTGTCACAACAAGGTAGGAGGCACTATATGGATCTAGAGCAGTCCAGGGTCTACGATGATTCTCAGCATCATATGCACTGGTCACTTTAG 1143 0.5223 MGSSSVTEAAAASNSSTESLNGLKFGQKIYFEDVGVGAPAKSGGGASSSSSGATPPKKGRGCGVQGAQPPRCQVEGCKVDLSDAKAYYSRHKVCSMHSKSPRVVVAGQEQRFCQQCSRFHQLSEFDQVKRSCRRRLAGHNERRRKPPPSSLLASRYGRLTPANFDSSSRGGGILMEFATYPKLSLRNPMPTPSSSEQLPGNPSVTLPWEGNSETTPPSLLFLQAGCSSVGGTSYSGSRNSSSGESFAGVTDSSCALSLLSNQAWAPRNRAPSLGMNNFMSFDDTPITQLAAASSHSHHGHGPSIHHQLSNAPWCFKGIDAAANCSHEIAPDLGLGHQISHPITGPLPGELDVSQQGRRHYMDLEQSRVYDDSQHHMHWSL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3136 380 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 12 313 IPR044817 GO:0003677
Bisa07g3136 380 MobiDBLite consensus disorder prediction 186 205 - -
Bisa07g3136 380 MobiDBLite consensus disorder prediction 136 157 - -
Bisa07g3136 380 MobiDBLite consensus disorder prediction 185 205 - -
Bisa07g3136 380 FunFam Squamosa promoter-binding-like protein 14 63 133 - -
Bisa07g3136 380 SUPERFAMILY SBT domain 70 151 IPR036893 GO:0003677|GO:0005634
Bisa07g3136 380 ProSiteProfiles Zinc finger SBP-type profile. 69 146 IPR004333 GO:0003677
Bisa07g3136 380 MobiDBLite consensus disorder prediction 40 70 - -
Bisa07g3136 380 Pfam SBP domain 72 145 IPR004333 GO:0003677
Bisa07g3136 380 Gene3D - 62 133 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3136 Bisa-ChrBisa07 65936282 65939276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3136 23 380 SBP-box Gene Family AT2G42200 42.711 3.13e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa07g3136 SBP 2.9e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g3136 07 65936282 65939276 Bisa07g3136 07 65936282 65939276 ECH