Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3130 ATGGCTTCCAGCATAAACCAAACAACCACTCAATTCGAACCACTGCTACCATCTCCACATCGTCGTCATCAGCAACAGCAACCACAAGACCACCAATCATCTTTCGGAATGATGCAATTCTCTTCTCCATCCTACTCTGTCCCTGGAAACTACTTAAGCAAGGATTCTGGAAGCTACGATCTGGGTGAATTGGATCAAGCCCTTTTTCTGTATCTTGATGGACAACCAGACCCGTCCATCGTGCAAGACCAAAAACCAGAGAACTTATCGTCGACTGGGATGAGGCCTCCGACTCTCAACATTTTCCCATCGCAGCCTATGCACGTAGACCCACCCTCAACCAAGGCTAGCATGGAATTAGTTTCTCCCCAAATAGCCAGTGGTTCCAAGAGACCATCAGTGCCCTCAGTGGAGTTGGCCAACCCACGAAATGAAGCAGCCTCCGCACCTGAACCAACCAAAACTGTCAAGCGAGAGAGCAATCGCAAGGGTCCAACGTCAAATTCTGAACAGGAAGCACCCAAAACCCCAGATCCTAAGACTCTACGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGTAGATACTACATTTTTTATGTCAATTGTGTGGGTTCACACATTTTTGGAAAGGCTTTTCAAAGACCTCTTATTTTTGAGCTGCGGATCCATTGATTTGTTGCCTCAGGCATACGTTCAGCAGCTAGAGTCAAGTAGGATTAGGCTTAATCAGCTGGAGCAAGAACTACATCGTGCTAGAGCTCAAGGCGCATTCTTTGGTGGAGGAGCAGCTTTGGGAGGAGAGCAAGGGCTTCCTATGGCTATGAGCAGCACTAGCTCAGATGCTGCAATGTTTGACGTAGAATATGCAAGATGGCTAGAGGAGCACCATCGAATAGTAAGCGAGCTAAGAGCTGCAGTTCAAGAGCACCTTCCTGAGAACGAGCTTCGGCTGTATGTGGACAATTGCTTGGCACATTATGACCAGGTAATGAACCTCAAGAGCATAGTGACCAAAACAGACGTATTCCACATTGTGTCTGGCATGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATCGGTGGGTCCAGGCCATCTGAACTCATTAAGATAATTTTGAGTCAGATTGAGCCTCTGACGGAGCAACAGATACTGGGAATATGTGGGTTACAACAATCTACGCAAGAGGCAGAAGATGCTCTCTCCCAAGGGCTTGAAGCTCTGAATCACTCTCTGTTGGACACTATAACATCAGATTCATTGAGCTGTCCTCCCAATATGGCAAACTACATGGGACAGATGGCCATGGCCATTCATAAGCTCTCTACTCTTGAAGGTTTCGTGAGACAGGCAGATAATCTTCGGCATCAGACCATTCACCGTCTGCATCAGATTCTGACAACGCGTCAAGCGGCGAGGTGTATGGTGGCGATGGCGGAGTACTCCCACCGTCTGAGAGCACTGAGTTCTCTGTGGATGGGACGCCATCGGCAGGAATAA 1524 0.4816 MASSINQTTTQFEPLLPSPHRRHQQQQPQDHQSSFGMMQFSSPSYSVPGNYLSKDSGSYDLGELDQALFLYLDGQPDPSIVQDQKPENLSSTGMRPPTLNIFPSQPMHVDPPSTKASMELVSPQIASGSKRPSVPSVELANPRNEAASAPEPTKTVKRESNRKGPTSNSEQEAPKTPDPKTLRRLAQNREAARKSRLRKKVDTTFFMSIVWVHTFLERLFKDLLFLSCGSIDLLPQAYVQQLESSRIRLNQLEQELHRARAQGAFFGGGAALGGEQGLPMAMSSTSSDAAMFDVEYARWLEEHHRIVSELRAAVQEHLPENELRLYVDNCLAHYDQVMNLKSIVTKTDVFHIVSGMWKTPAERCFMWIGGSRPSELIKIILSQIEPLTEQQILGICGLQQSTQEAEDALSQGLEALNHSLLDTITSDSLSCPPNMANYMGQMAMAIHKLSTLEGFVRQADNLRHQTIHRLHQILTTRQAARCMVAMAEYSHRLRALSSLWMGRHRQE 507
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3130 507 ProSiteProfiles DOG1 domain profile. 289 503 IPR025422 GO:0006351|GO:0043565
Bisa07g3130 507 PANTHER TRANSCRIPTION FACTOR TGA9 99 506 - -
Bisa07g3130 507 Pfam Seed dormancy control 307 381 IPR025422 GO:0006351|GO:0043565
Bisa07g3130 507 Coils Coil 242 262 - -
Bisa07g3130 507 Pfam Basic region leucine zipper 177 202 IPR004827 GO:0003700|GO:0006355
Bisa07g3130 507 MobiDBLite consensus disorder prediction 117 131 - -
Bisa07g3130 507 MobiDBLite consensus disorder prediction 104 183 - -
Bisa07g3130 507 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 183 198 IPR004827 GO:0003700|GO:0006355
Bisa07g3130 507 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa07g3130 Bisa-ChrBisa07 65800943 65806653 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3130 49 507 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 56.936 1.86e-179 510
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bisa07g3130 DOG1 5.6e-30 No_clan
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2300 03 33616334 33622449 Bisa07g3130 07 65800943 65806653 CCT