Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3122 ATGGATTTGAATTCGCATCAGAATTATCAGCAGCACCAACAGCATCAATCCAATTCTGGATTGCTTCGGTTTCGCTCAGCCCCTAGCTCACTTCTCGCAAATTTCACTCAAGGCGTTGAATCTGCTGAATCGGAGAGACGAATTTCTAGATTCGCAAACTATAGTAATAGCGGCGTTACGGCGTCGCCTTGTTTTCAAGAATTGGAAGACAAACCTGGTAAAGCACCAGGGGAGGCGGCTCTGAACAAGATGAATTCGCAGCAAGGGTATAGCGGGAGTGGGCTGCCCCCTTACTATCCTAGGCATAGTTCTTCTGCGAGTCCCTCCATGGATGTCTCCTATGGACTCCCCGGTTCAATGGGAATGGATCATCAAACACACGCCAAAAGCTTTGGTTCGCATCCTCAGAGGCAGAGTAGCTCTCCTGCTGGCCTTTTCTCCAACATCTCCTTTCCGAATGGGTATGGCACCATGAAAGGTGTAAGAAATTACGGTAGTAATGGTGAACTTGCTGCATCTTTGAACGGATTGAAGAATCAGATCAGCTTCTCATCAAGAAGTACTTCTTTGGGAGTGTTATCACAGATATCTGAAGTAGGGTGTGAGAGCATTGGAGCAACTAGCCCTGATGGTGGTAGGCTCGGAGCTGCCGGTGGTGATTCTCGATATTATGGTCCTGGCTGCCCTTATGGTTCCTGGAATGATCACTCAAATGTCTCAGAAAATCTCACTGGCTTGAAAAGAGAGGAAACTAGCAATGAAACTTTATTTTCTGATAGTCAGAACGGAGAGCTGGGAAATCGGGTTCATGTACTATCGCATCACTTGAGTTTGCCTAAAACCCCACCAGAAATGGCTGCTGTGGAGAAGTTTCTTCAATTCCCAGATTCTGTTCCTTGTAAAATCAGAGCAAAGCGGGGCTGTGCTACTCATCCTCGAAGCATTGCAGAAAGGGTGAGAAGAACTCGGATCAGTGAACGAATGAGAAAATTACAAGAGCTTGTCCCAAACATGGACAAGCAAACAAACACAGCTGACATGTTGGACTTGGCTGTTTTATACATTAAAGATCTTCAGAAACAATTCAAAACTCTGAGTGAGAGACGGGCAAACTGCAAATGTACAAGCATCAAGAAGGCAGCGACAAATCAAATAGTTTGA 1161 0.4565 MDLNSHQNYQQHQQHQSNSGLLRFRSAPSSLLANFTQGVESAESERRISRFANYSNSGVTASPCFQELEDKPGKAPGEAALNKMNSQQGYSGSGLPPYYPRHSSSASPSMDVSYGLPGSMGMDHQTHAKSFGSHPQRQSSSPAGLFSNISFPNGYGTMKGVRNYGSNGELAASLNGLKNQISFSSRSTSLGVLSQISEVGCESIGATSPDGGRLGAAGGDSRYYGPGCPYGSWNDHSNVSENLTGLKREETSNETLFSDSQNGELGNRVHVLSHHLSLPKTPPEMAAVEKFLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVLYIKDLQKQFKTLSERRANCKCTSIKKAATNQIV 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3122 386 MobiDBLite consensus disorder prediction 81 112 - -
Bisa07g3122 386 MobiDBLite consensus disorder prediction 129 146 - -
Bisa07g3122 386 Pfam Helix-loop-helix DNA-binding domain 313 359 IPR011598 GO:0046983
Bisa07g3122 386 Coils Coil 355 375 - -
Bisa07g3122 386 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 311 371 IPR036638 GO:0046983
Bisa07g3122 386 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 25 374 - -
Bisa07g3122 386 Gene3D - 309 380 IPR036638 GO:0046983
Bisa07g3122 386 SMART finulus 314 364 IPR011598 GO:0046983
Bisa07g3122 386 MobiDBLite consensus disorder prediction 66 146 - -
Bisa07g3122 386 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 308 358 IPR011598 GO:0046983
Bisa07g3122 386 FunFam Transcription factor bHLH130 family 309 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3122 Bisa-ChrBisa07 65706477 65708542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3122 1 364 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 47.120 7.20e-95 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa07g3122 HLH 5.4e-09 No_clan