LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa07g3121	ATGCCTCTCCCTCTCCTCATTGCTTCATTTCTCATATGCTTCCTTGCTTCTTTTACTACCTCTCTGAACTCCGATGGGCTCTCTCTTCTCGCCCTCAAAGCCGCCATTGACTCCGATCATACTGGCGTTCTGGACTCGTGGTCCGACTCCGATTCCACCCCCTGTCGCTGGACCGGTGTCGTCTGCGCCCACGGCCGAGTCACCCAACTCTACCTTCCTAATAAAGCATTAACAGGCTACATTCCCTCTGAACTCGGCTTGCTCGACTCTCTCAAGCGACTCAGTCTTCCCCACAACAACTTCTCCAACGTAATTCCTTCAAGTCTCTTCAACGCCACCAACGTCGTCGTTTTGGACCTTTCTCACAACTCCCTCTCTGGTCCTATCCCCACTCAAATCAAGTCTCTCAAATCACTCAGGCATTTGGATCTATCCAATAACTTGCTCAATGGAACTCTCCCTGAAGCTCTCGCCCAGCTCACTGGCCTCGTCGGAACTTTAAATCTCTCTCAAAATCTATTCTCCGGCGGGGTCCCGGAGTCTCTCGGGAAACTCCCCGTGATAGTGAGTTTAGATCTCCGAAGCAATAATCTGACCGGAAAAATTCCTCAGGTAGGTTCGCTGCTAAACCAGGGCCCAACAGCTTTCTCGGGCAACCCTGGGCTTTGTGGGTTTCCTTTGCAGAATGCATGCCCAGAAGCCCGAAAACCCGAGATTTTCAGGAGCACCGAAGGCCCGAAAAACCCAAGAACCATTAACCCGGGCTTCCCAAGCGGAGGTCAAGAAGAGAAGGCAAAAGAGCGAGGTGGGTACGTCACTGTCCCCTTAATTTCCGGCGTCTCGTTGGTGGTTGGGGCGGTTTCATTGTCAGTGTGGCTGTTTCGAAGAAGACGGACAGCTGACAAGAGCAAAATGAGAAAACCAAAATCAGACAATAATGTTGATGAAGGCGAAGAAGGAGAACAGGGTAAATTCATGGTGGTTGATGAAGGGTTCAATTTGGAATTAGAGGATTTATTAAGGGCATCTGCGTATGTGGTGGGGAAAAGCAGGAGCGGGATCGTGTATAAGGTGGTCGCTACCGGAAAGGGGTCATGCCCGGCGGCGACAGCGGTGGCTGTCAAGCGGTTGAGTGAAGGTGACGCCACGTGGCGTCTCAAAGAGTTTGAATCCGAGGTGGAGGCCATTTGTAGGGTCCACCACCCCAATATTGTTCCACTGAGAGCATATTACTATGCAAATGATGAGAAACTACTTATCGCTGATTTCATCCGCAACGGAAGCTTGCACACTGCGTTGCATGTAATGAGAGCATGCCACATATTATGGCGTGTGCATATAGCTGATGCCATTGGTGGCCGAGGGCCTTCCAATTCTTTGCCACCACTGCCATGGGCAGCTAGGTTAAAAATTGCTCAAGGAGCAGCCAGGGGTTTGATGTACATACACGAGTTCAGTGGTCGAAAGTATGTTCATGGCAACCTCAAGTCAACAAAGATCTTACTGGACATTGACCTTCATCCTTACATATCTGGTTTTGGATTTACTTGTCTTGGTTTGGGGCTGGGCACCTCAAAAATGGCGCTGAAACGGCAGAATTCAAAGCAGTCTGTTGTAAGTGTAACCTCATCAATGTATTCAAAAGTTGCAACTGCCTCTAACAACTACTTGGCACCTGAGGTTCGCATGGGCATGGCTGGTGGGAAGTTCACTCAGAAATGTGATGTGTACTCTTTTGGAATAGTGCTCTTAGAACTTCTGACGGGCCGGCTGCCAGATTCTGGGCCGGAAAATGATGGAAAGGTATTAGAGAGCTTTGTGAGGAAAGCATTCAGGGAAAAGCAGCCCATGTCTGAGATTATAGACCCAGCACTTCTGCCTGAGGCTCATACTAAGAAACAAGTTGTTGCAGCATTTCACATTGCCCTGAACTGCACAGAACTTGACCCAGAGTTGCGACCTAGAATGAGAACTGTGTCTGAGAGCCTTGATCGTATCAAAATACACTCAGAAAATTGA	2019	0.4923	MPLPLLIASFLICFLASFTTSLNSDGLSLLALKAAIDSDHTGVLDSWSDSDSTPCRWTGVVCAHGRVTQLYLPNKALTGYIPSELGLLDSLKRLSLPHNNFSNVIPSSLFNATNVVVLDLSHNSLSGPIPTQIKSLKSLRHLDLSNNLLNGTLPEALAQLTGLVGTLNLSQNLFSGGVPESLGKLPVIVSLDLRSNNLTGKIPQVGSLLNQGPTAFSGNPGLCGFPLQNACPEARKPEIFRSTEGPKNPRTINPGFPSGGQEEKAKERGGYVTVPLISGVSLVVGAVSLSVWLFRRRRTADKSKMRKPKSDNNVDEGEEGEQGKFMVVDEGFNLELEDLLRASAYVVGKSRSGIVYKVVATGKGSCPAATAVAVKRLSEGDATWRLKEFESEVEAICRVHHPNIVPLRAYYYANDEKLLIADFIRNGSLHTALHVMRACHILWRVHIADAIGGRGPSNSLPPLPWAARLKIAQGAARGLMYIHEFSGRKYVHGNLKSTKILLDIDLHPYISGFGFTCLGLGLGTSKMALKRQNSKQSVVSVTSSMYSKVATASNNYLAPEVRMGMAGGKFTQKCDVYSFGIVLLELLTGRLPDSGPENDGKVLESFVRKAFREKQPMSEIIDPALLPEAHTKKQVVAAFHIALNCTELDPELRPRMRTVSESLDRIKIHSEN	672

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa07g3121	672	FunFam	Leucine-rich repeat receptor-like kinase	27	138	-	-
	Bisa07g3121	672	Pfam	Leucine rich repeat N-terminal domain	23	62	IPR013210	-
	Bisa07g3121	672	Gene3D	Phosphorylase Kinase; domain 1	317	423	-	-
	Bisa07g3121	672	SUPERFAMILY	L domain-like	25	228	-	-
	Bisa07g3121	672	SUPERFAMILY	Protein kinase-like (PK-like)	346	668	IPR011009	-
	Bisa07g3121	672	MobiDBLite	consensus disorder prediction	240	264	-	-
	Bisa07g3121	672	Pfam	Leucine rich repeat	90	149	IPR001611	GO:0005515
	Bisa07g3121	672	Pfam	Protein tyrosine and serine/threonine kinase	347	663	IPR001245	GO:0004672\|GO:0006468
	Bisa07g3121	672	Gene3D	Ribonuclease Inhibitor	21	164	IPR032675	-
	Bisa07g3121	672	MobiDBLite	consensus disorder prediction	304	320	-	-
	Bisa07g3121	672	MobiDBLite	consensus disorder prediction	301	320	-	-
	Bisa07g3121	672	Gene3D	Transferase(Phosphotransferase) domain 1	426	672	-	-
	Bisa07g3121	672	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	10	670	IPR046959	-
	Bisa07g3121	672	Gene3D	Ribonuclease Inhibitor	165	233	IPR032675	-
	Bisa07g3121	672	FunFam	Leucine-rich repeat receptor-like protein kinase	139	233	-	-
	Bisa07g3121	672	ProSiteProfiles	Protein kinase domain profile.	341	666	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa07g3121	Bisa-ChrBisa07	65692826	65695691	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa07g3121	22	667	Receptor kinase-like Gene Family	AT3G57830	58.548	0.0	728

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Bisa07g3121		PK_Tyr_Ser-Thr	1.8e-25	CL0016