Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3114 ATGGCTGCATTCTGTACATACCTATTCCTTCTCTCTCTAATCTTCACAATTTTCAATCTTGGTTCGTCTTCTTCGTCAGAGGCGGATATCCTTCTCTCCTTCAAGGCCTCCATTGCAGACTCGAGGAAGGCTCTGTCAAGCTGGTCCAATACTTCAGCAACTCATTACTGTAACTGGACGGGGATCGCCTGCTCCACCACCACTGCTTCACCTACTGTTACTTCCATTAATCTTCAGAACTTGAATCTTTCTGGGGATATAGCAGCTTCCATATGTGACCTTCCAAATCTGTCTTACCTCAACCTCGCTGACAATCTATTCAACCAGCCCATCCCTCTTCATCTTTCTCAGTGCAGTTCGCTGGAGACTCTGAATCTCAGTAATAATCTCATCTGGGGGACCATCCCATTGCAGATTTCTCAGTATGGTTCCTTGAGAGTGCTTGATTGCAGCAGGAACCATATAGAAGGAAGCATCCCAGAAAGCTTGGGCTCACTCAAGAACCTTGAAGTTCTTAACTTGGCAAGTAACTTGCTATCTGGTGAGGTACCTGCTGTTTTCAGGAATTTGACCAAGCTTGCTGTTCTTGACTTGTCTCAAAATCCATACCTGGTGAGTGAGATTCCGGAGGACATTGGCGAACTTGGAAGTCTCCGGCAGCTTCTATTGCAGAGCTCTGGTTTTCAAGGTGAAATTCCAGATTCTGTTGTGGGTCTGCGTAGTTTGACGCATTTGGACCTCTCTGAGAACAATCTAACCGGTGAGATTCCTCAGCCTCTGGTATCTTCTCTCAAGAACCTGGTGTCTTTTGATGTTTCACAGAACAAGCTTCTGGGGTCATTTCCAATTGGCATTTGCAAAGGAAAAGGCCTAATAAATTTGAGTCTCCACACAAATATCTTCACCGGTTCAATACCCAACTCCATCAGTGAATGTAGGAATCTCGAGAGGTTTCAAGTTCAGAACAATGGGTTTTCTGGAGGTTTCCCTGATTCATTGTGGTCACTACCCAAAGTTAAGCTCATTAGAGCTGAAAACAACAGATTCTCAGGACAAATACCTGACTCCATATCGGGAGCTGTCCAGTTGGAGCAAGTTCAGCTTGACAATAACAGCTTTGCCGGTAAAATTCCTCAGAGTCTTGGTCTAGTCAAGAGCTTATACAGATTCTCTGCCTCTCTTAATCGTTTCTATGGAGAACTTCCTCTAAACTTTTGTGATTCCCCTGTCATGAGTATTGTGAATCTCTCTCACAATTCCCTTTCTGGTCAAATCCCAGAGCTGAAAAACTGCCGGAAACTAGTTTCATTGTCTTTAGCAGACAATAGTCTCACTGGACAAATACCTCCGTCCCTTGCTGAATTACCAGTACTAACTTACCTTGATCTCTCAGCAAACAATCTCACTGGTTCAATCCCACAAGGCCTTCAAAATCTAAAGCTTGCCCTTTTCAATGTTTCCTTCAATCAGCTATCTGGTAAGGTACCATACTCCTTGATTTCTGGTCTGCCTGCCTCATATTTGGAAGGAAACCCTGAACTTTGTGGTCCTGGATTACCCGCTTCCTGTTCTGATGACCCTCCAAGACGCCATTCGGGTGGTCTCACTGCCCTAGCATGTGCCCTCATCTCTGTGGCCTTCGTTGCTGGGACTGCCATTGTTGCTGCTGGATTTATATCGTACAGGAGGTCTTGCAAGCGGAATCAGATAGGAGTTTGGCGCTCAGTGTTCTTCTATCCTCTTAGAATTACCGAGAACGATCTGCTTGTGGGAATGGATGAGAAAAGCTTGATTGGAAATGGTGGGGTGTTTGGAAAAGTATATGTTGTGAGTTTACCAAGTGGCGAACAAGTGGCTGTGAAGAAGCTGGTCAATTTTGGGAACCAGACTTCAAAAAGTTTGAAAGCTGAGGTCAAGACACTGGCCAAGATTAGGCATAAGAACGTTGTCAAAATTCTCGGGTTTTGCCATTCTGATGAGTCAATCTTCCTCATTTATGAGTACTTACAAGAAGGAAGCTTAGGAGACTTGATCTCCCGTCAGGATTTTGAGCTGCAGTGGGATGCAAGGTTGAGGATAGCCATCAGGGTAGCTCAAGGACTAGCATATCTTCACAAGGACTATGTTCCTCACTTGCTTCACAGAAACGTGAAGTCGAAGAACATCCTGCTTGATGCAAACCTTGAGCCAAAACTCACAGATTTCGCTCTTGATAGAATCGTGGGAGAAGCTGCATTTCAGTCAACTGTTGCCTCTGAAGCGGCATCTTCCGGCTATAATGCTCCAGAATATGGGTACTGTAAGAAAGCAACAGAAGAACTGGACATCTACAGCTATGGGGTTGTATTAATGGAGCTAGTGACAGGGAAGCAAGCGGAGGAAGCAGTGTCAACGGAGTCAGTTGACATCGTGAAGTGGGTGAGAAGGAGAGTGAACATCACTGATGGGGTACATCAAGTGCTTGACCCCAAAATATCACATAGCAATCAGCAAGAGATGACTGGGGCTTTAGAAATCGCTCTTCGTTGCACTTCTGTGGTGCCTGAAAAGAGACCATCCATGGCAGAAGTTGTACGAGCTCTTCAGTCGCTCGAGTCACGCAGCGGCGTCGCAAATATGGAGGACCCGAATTGGGAAAATTCGGTTCCAGTATGA 2655 0.4542 MAAFCTYLFLLSLIFTIFNLGSSSSSEADILLSFKASIADSRKALSSWSNTSATHYCNWTGIACSTTTASPTVTSINLQNLNLSGDIAASICDLPNLSYLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWGTIPLQISQYGSLRVLDCSRNHIEGSIPESLGSLKNLEVLNLASNLLSGEVPAVFRNLTKLAVLDLSQNPYLVSEIPEDIGELGSLRQLLLQSSGFQGEIPDSVVGLRSLTHLDLSENNLTGEIPQPLVSSLKNLVSFDVSQNKLLGSFPIGICKGKGLINLSLHTNIFTGSIPNSISECRNLERFQVQNNGFSGGFPDSLWSLPKVKLIRAENNRFSGQIPDSISGAVQLEQVQLDNNSFAGKIPQSLGLVKSLYRFSASLNRFYGELPLNFCDSPVMSIVNLSHNSLSGQIPELKNCRKLVSLSLADNSLTGQIPPSLAELPVLTYLDLSANNLTGSIPQGLQNLKLALFNVSFNQLSGKVPYSLISGLPASYLEGNPELCGPGLPASCSDDPPRRHSGGLTALACALISVAFVAGTAIVAAGFISYRRSCKRNQIGVWRSVFFYPLRITENDLLVGMDEKSLIGNGGVFGKVYVVSLPSGEQVAVKKLVNFGNQTSKSLKAEVKTLAKIRHKNVVKILGFCHSDESIFLIYEYLQEGSLGDLISRQDFELQWDARLRIAIRVAQGLAYLHKDYVPHLLHRNVKSKNILLDANLEPKLTDFALDRIVGEAAFQSTVASEAASSGYNAPEYGYCKKATEELDIYSYGVVLMELVTGKQAEEAVSTESVDIVKWVRRRVNITDGVHQVLDPKISHSNQQEMTGALEIALRCTSVVPEKRPSMAEVVRALQSLESRSGVANMEDPNWENSVPV 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3114 884 Gene3D Ribonuclease Inhibitor 156 259 IPR032675 -
Bisa07g3114 884 Gene3D Ribonuclease Inhibitor 260 526 IPR032675 -
Bisa07g3114 884 FunFam Leucine-rich repeat family protein 26 184 - -
Bisa07g3114 884 SUPERFAMILY L domain-like 206 521 - -
Bisa07g3114 884 PRINTS Leucine-rich repeat signature 242 255 - -
Bisa07g3114 884 PRINTS Leucine-rich repeat signature 455 468 - -
Bisa07g3114 884 FunFam probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 583 668 - -
Bisa07g3114 884 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Bisa07g3114 884 Pfam Protein kinase domain 594 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g3114 884 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 263 526 - -
Bisa07g3114 884 ProSiteProfiles Protein kinase domain profile. 593 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g3114 884 SUPERFAMILY Protein kinase-like (PK-like) 596 861 IPR011009 -
Bisa07g3114 884 Gene3D Phosphorylase Kinase; domain 1 586 668 - -
Bisa07g3114 884 SUPERFAMILY L domain-like 24 304 - -
Bisa07g3114 884 Gene3D Transferase(Phosphotransferase) domain 1 669 879 - -
Bisa07g3114 884 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 863 - -
Bisa07g3114 884 Pfam Leucine rich repeat 144 202 IPR001611 GO:0005515
Bisa07g3114 884 Gene3D Ribonuclease Inhibitor 26 143 IPR032675 -
Bisa07g3114 884 SMART LRR_typ_2 239 263 IPR003591 -
Bisa07g3114 884 SMART LRR_typ_2 166 189 IPR003591 -
Bisa07g3114 884 SMART LRR_typ_2 94 118 IPR003591 -
Bisa07g3114 884 SMART LRR_typ_2 190 215 IPR003591 -
Bisa07g3114 884 SMART LRR_typ_2 119 142 IPR003591 -
Bisa07g3114 884 SMART LRR_typ_2 455 478 IPR003591 -
Bisa07g3114 884 SMART LRR_typ_2 264 288 IPR003591 -
Bisa07g3114 884 Pfam Leucine Rich Repeat 241 260 IPR001611 GO:0005515
Bisa07g3114 884 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 669 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3114 Bisa-ChrBisa07 65419245 65422001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3114 31 864 Receptor kinase-like Gene Family AT5G06940 63.853 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa07g3114 Pkinase 5e-41 CL0016