Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3110 ATGGACACCGATAATGGTGAGACCAAGTCCAAGATGGAAGACTATGAAGTGATTGAGCAAATTGGCAGAGGAGCATTCGGCTCCGCTTTTCTTGTTCTCCACAACTCTGAGAATAAGAAGTATGTGCTGAAGAAGATTCGCTTAGCTAAGCAAACCGAGAAGTTCAAACGTACAGCGCACCAAGAGATGAACCTAATTGCAAAACTAAATAACCCATATATTGTGGAGTACAAAGATGCCTGGGTGGAGAAGGGAGACTATATTTGTATTATAACTGCATACTGCGAGGGAGGTGACATGGCTGAGAACATAAAAAAAGCTCGAGGATCATTTTTTCCCGAGGAGAAGGTCTGCAAATGGCTGACTCAATTGCTTATAGCTGTGGACTACCTGCACTCTAATCGTGTACTTCACAGAGATCTTAAGTGTTCCAACATATTCCTGACCAAAGACAGTGACATTCGGCTTGGTGACTTCGGTCTGGCAAAGCTGCTGAATACAGAAGACCTTGCTTCCTCGGTTGTTGGAACTCCAAACTACATGTGTCCTGAGCTACTTGCAGATATACCTTATGGTTATAAATCTGATATATGGTCACTTGGTTGCTGCATGTTTGAAATTGCTGCACATCAACCAGCATTTCGTGCTCCTGACATGGCTGGACTTATCAATAAAATAAATAGATCCTCCATATCTCCTCTGCCAATTGTTTATTCTTCCACCCTGAAACAACTTATAAAGAGCATGCTGAGGAAAAACCCAGAACATAGACCAACAGCAGCTGAATTGTTAAGACATCCTCTTTTACAACCATATGTTCTCCGCTGTCGTAATGCATCATCTAATTTTCTTCCAGTATATCCCATAGTTAACTCAAAAGATAGAACAAAACGATCTTACAAATCCGGTGGCAGAAAAGACCACAAGGACAAAGAAGTGGGATTAGAAAATCATTTGGAATTGGTTCATCCATTTGAGGGAAATGGAGAGGTACAGCCAAGCCATCTGCCTAACAATGGCAAGCTATTAATCTCGAGAAGTGCAGAAGACAACCTTCAGACCAAGATGGTTGATTCTACCAGCTTCACAGTGGAATCATCTACTAGTATCAGCGGCTCGAAGGATGGGTCAACAACATCTGAATCTACCATTTGCAGTGTAGGCAAGGAAGCGGACTATAACAATATACCTGCAAGGGAAACAACCGAGAATGGGATTACATCAAAGAGTAAACCAGATCCTGAACCTGAAGAACAAAGATTTGATGCTGAACAACTTCAAAAATTAGAAGGGGTTGACGCAACTGCAGTGACCGAGAAAGTTGAAGATTCCTTTCCCAATGGAGATTTTGACAAAGCTGAAGCACAGGGAGAAGATGTCAAACCTGAGGACTCCAGGAAATCAACAACATCAAGCGAGAGCAGCACTGATAAAGATGGGTCTCTTGATGAGGAAAGGTCATCACCAACTATGCAGCATAGTAGTAAGGTTGAAGATAAATCTGATTCTGGAAGCTGCTTACAGAAAAGGGAAAACCTAGAGACATGTACAGCAGACTCGCACTTGGACTGCTTGTCTTTTGGGAGTAATGATACACTTGCAGGTAAGGATGAAGCCCGAACAAAAACACACAACCTCATCTGCTCCACGCACAAAGAAAATGATAGTGCTTGTGTGGTTGATCAGACACCAAGTGACATTTCATTGAGTACACTTACTGCAAATGGTGGTGATGAAACCAAGAGCGAATTGGATAGTCCCTGCCAGCAAAGAGCTGACGCTCTGGAGTCTCTGCTTGAGTTATGTGCTGAGCTACTTAAGCAAGACAAACTTGAAGAGCTTGCTGGTGTGCTGAGACCATTTGGCCAAGAAGCTGTCTCTTCCAGAGAAACAGCAATATGGTTGACAAAGAGCCTCCTGTCCGCACATAAATTTAATACAGAAACCTAG 1950 0.4277 MDTDNGETKSKMEDYEVIEQIGRGAFGSAFLVLHNSENKKYVLKKIRLAKQTEKFKRTAHQEMNLIAKLNNPYIVEYKDAWVEKGDYICIITAYCEGGDMAENIKKARGSFFPEEKVCKWLTQLLIAVDYLHSNRVLHRDLKCSNIFLTKDSDIRLGDFGLAKLLNTEDLASSVVGTPNYMCPELLADIPYGYKSDIWSLGCCMFEIAAHQPAFRAPDMAGLINKINRSSISPLPIVYSSTLKQLIKSMLRKNPEHRPTAAELLRHPLLQPYVLRCRNASSNFLPVYPIVNSKDRTKRSYKSGGRKDHKDKEVGLENHLELVHPFEGNGEVQPSHLPNNGKLLISRSAEDNLQTKMVDSTSFTVESSTSISGSKDGSTTSESTICSVGKEADYNNIPARETTENGITSKSKPDPEPEEQRFDAEQLQKLEGVDATAVTEKVEDSFPNGDFDKAEAQGEDVKPEDSRKSTTSSESSTDKDGSLDEERSSPTMQHSSKVEDKSDSGSCLQKRENLETCTADSHLDCLSFGSNDTLAGKDEARTKTHNLICSTHKENDSACVVDQTPSDISLSTLTANGGDETKSELDSPCQQRADALESLLELCAELLKQDKLEELAGVLRPFGQEAVSSRETAIWLTKSLLSAHKFNTET 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3110 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Bisa07g3110 649 Gene3D Phosphorylase Kinase; domain 1 2 94 - -
Bisa07g3110 649 ProSiteProfiles Protein kinase domain profile. 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g3110 649 FunFam Serine/threonine-protein kinase Nek6 1 94 - -
Bisa07g3110 649 CDD STKc_Nek 14 269 - -
Bisa07g3110 649 MobiDBLite consensus disorder prediction 356 421 - -
Bisa07g3110 649 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Bisa07g3110 649 FunFam serine/threonine-protein kinase Nek6 isoform X2 95 283 - -
Bisa07g3110 649 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g3110 649 MobiDBLite consensus disorder prediction 356 389 - -
Bisa07g3110 649 SMART serkin_6 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g3110 649 MobiDBLite consensus disorder prediction 444 506 - -
Bisa07g3110 649 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 12 600 - -
Bisa07g3110 649 SUPERFAMILY Protein kinase-like (PK-like) 12 300 IPR011009 -
Bisa07g3110 649 Gene3D Transferase(Phosphotransferase) domain 1 95 282 - -
Bisa07g3110 649 MobiDBLite consensus disorder prediction 441 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3110 Bisa-ChrBisa07 65374494 65379885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3110 9 270 MAP Kinase Kinase Kinase AT3G13530 33.835 7.07e-37 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Bisa07g3110 Pkinase 3.4e-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2324 03 34056877 34061615 Bisa07g3110 07 65374494 65379885 CCT
Bisa07g3110 07 65374494 65379885 Bisa07g3110 07 65374494 65379885 ECH