Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3102 ATGGAAACTTGCAGAAAGTCTCCCCTAAAGCCATGGAAGAAAGGGCCAGCCAGGGGGAAGGGTGGCCCTCAGAATGCTTCATGTGAGTACCGAGGCATCCGACAAAGAACGTGGGGCAAATGGGTTGCTGAGATTAGAGAGCCGAAGAAGAGAACCAGACTCTGGCTTGGTTCTTTTGCCACTGCTGAAGAAGCAGCCATGGCTTATGATGAGGCTGCCATGAGACTCTATGGACCAGATGCTTATCTTAATCTTCCCCACCTTCAACCCACCTCCACTTCTGTTACATCTCAAAAGTTCAAATGGTTGCCTTCTAAGAGCTTCCTTTCAATGTTTCCTTCTCGTGGACTGCTCAATGTAAATGCACAGCCTAGTGTCAACTTAATTCATCATAGGTTACAACGGCTTAAGCAGGAGGTGGTACTAGGAAAAACCCCTTTTGGTTCATCCAGTGATCCAAACGCAGAACTTCAGGTAATATGCAGAAAACGTCATGCTTCAGAGGAACAAAAAGCTGAAATATTGTCAGAAAAGATGGTTGAAGATATTCGGGACAAACCCCAAATTGATCTCCATGAGTTTCTTCAACAGCTGGGAATGCAGAAAGAAAAAAGACAGTCAGAAAGATCTGATAGCTCAGGAATTTCCTCAGGGACCGAAGCTTTATCAAGGGATTACAATGATTTTAACTGGGAAGCAATTATCGAGATGCATGGAATGGCAGATTATCAGGGACTAGGTGCAACCTACTTCCAAGCATATGACATAAACGAAGAGCTTACTTTCTCTAGTTCCATTTGGAACTTCTAA 810 0.442 METCRKSPLKPWKKGPARGKGGPQNASCEYRGIRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAAMRLYGPDAYLNLPHLQPTSTSVTSQKFKWLPSKSFLSMFPSRGLLNVNAQPSVNLIHHRLQRLKQEVVLGKTPFGSSSDPNAELQVICRKRHASEEQKAEILSEKMVEDIRDKPQIDLHEFLQQLGMQKEKRQSERSDSSGISSGTEALSRDYNDFNWEAIIEMHGMADYQGLGATYFQAYDINEELTFSSSIWNF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3102 269 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Bisa07g3102 269 MobiDBLite consensus disorder prediction 1 26 - -
Bisa07g3102 269 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
Bisa07g3102 269 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Bisa07g3102 269 FunFam Ethylene-responsive transcription factor 2 28 87 - -
Bisa07g3102 269 CDD AP2 28 88 IPR001471 GO:0003700|GO:0006355
Bisa07g3102 269 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Bisa07g3102 269 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 215 - -
Bisa07g3102 269 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Bisa07g3102 269 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Bisa07g3102 269 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Bisa07g3102 269 MobiDBLite consensus disorder prediction 199 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3102 Bisa-ChrBisa07 65245074 65245883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3102 5 269 AP2-EREBP Transcription Factor Family AT3G57600 49.458 1.48e-81 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa07g3102 AP2 3.3e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2336 03 34240380 34243833 Bisa07g3102 07 65245074 65245883 CCT
Bisa07g3102 07 65245074 65245883 Bisa07g3102 07 65245074 65245883 ECH