Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3090 ATGGCCGAGCGTGGTGCTGGAGACCGTGGTGGTTTTGGCCGCGGATTTGGTGGCCGTGGTGGCCGTGGTGGACGCGGTGACCGTGGTCGTGGTCGCCGCAGAGGAGCTGGCCGCCGTGAAGAGGAGGAGAAGTGGGTTCCTGTGACCAAGCTAGGCCGTCTCGTCAAAGAGGGAAGGATTCGCAGCCTCGAGCAGATCTACCTCCACTCTCTACCAATTAAGGAACACCAGATCGTCGATACCCTGGTTGGTCCTAGCCTCAAGGACGAGGTCATGAAAATCATGCCAGTCCAGAAGCAGACTCGGGCTGGTCAGAGGACCCGCTTCAAGGCCTTCGTCGTCGTCGGTGACGGCAATGGACATGTGGGACTGGGCGTGAAGTGTAGCAAGGAAGTTGCCACTGCTATTCGTGGTGCTATTATATTGGCCAAGCTTTCGGTGATTCCAGTGAGAAGAGGTTACTGGGGTAACAAGATCGGGAAGCCCCATACAGTCCCGTGCAAGGTTACCGGTAAGTGTGGTTCGGTCACTGTGCGGATGGTTCCTGCTCCTCGTGGTGCTGGAATTGTTGCTGCTCGAGTGCCCAAGAAGGTTTTGCAGTTTGCAGGAATCGAGGATGTCTTCACCTCCTCTAGAGGGTCGACTAAGACTCTGGGAAATTTTGTCAAGGCGACTTTTGATTGTTTGCTGAAAACTTACGGGTTCCTGACTCCTGAGTTCTGGAAGGAGACTCGCTTCACCAAATCTCCATTCCAAGAGTACACAGATCTATTGGCAAAGCCAACAGGAAAGGCCCTAATCCTGGAGGAGGACACGGGGGATATTTGA 828 0.5459 MAERGAGDRGGFGRGFGGRGGRGGRGDRGRGRRRGAGRREEEEKWVPVTKLGRLVKEGRIRSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETRFTKSPFQEYTDLLAKPTGKALILEEDTGDI 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3090 275 PANTHER RIBOSOMAL S SUBUNIT 34 233 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bisa07g3090 275 MobiDBLite consensus disorder prediction 1 42 - -
Bisa07g3090 275 NCBIfam 30S ribosomal protein S5 40 247 IPR005711 GO:0003735|GO:0006412|GO:0015935
Bisa07g3090 275 Gene3D - 44 149 - -
Bisa07g3090 275 Gene3D - 150 243 IPR014721 -
Bisa07g3090 275 SUPERFAMILY Ribosomal protein S5 domain 2-like 163 243 IPR020568 -
Bisa07g3090 275 ProSitePatterns Ribosomal protein S5 signature. 104 136 IPR018192 -
Bisa07g3090 275 Pfam Ribosomal protein S5, C-terminal domain 171 243 IPR005324 GO:0003735|GO:0005840|GO:0006412
Bisa07g3090 275 ProSiteProfiles S5 double stranded RNA-binding domain profile. 87 150 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bisa07g3090 275 FunFam 40S ribosomal protein S2 44 149 - -
Bisa07g3090 275 FunFam 40S ribosomal protein S2 150 243 - -
Bisa07g3090 275 Pfam Ribosomal protein S5, N-terminal domain 87 151 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bisa07g3090 275 SUPERFAMILY dsRNA-binding domain-like 83 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3090 Bisa-ChrBisa07 65043547 65045026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3090 41 263 Cytoplasmic Ribosomal Protein Gene Family AT3G57490 90.135 4.13e-151 421