Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3087 ATGGAAATAGTGTGCGTGTTGTTGTATCTTGTGGTTGCTTGGTATGTGTCAAAATCTGAGCTTGTGGTTGTGGGTGCTGAGCTACAGGACCAAACTGTACTGCTTGCCATTAACCAAGAGCTTAGAGTAGCTGGATGGGACGTCAACAACTCAGATTACTGCTCTTGGCGAGGCGTTGGCTGTGGCAATCAGTCAATGGTGGTGAAGCTCGATCTCTCTCGTACAAACCTTCGAGGTAATGTCACTCTAGTGTCCCAGCTCAGAGCTTTGAGGCTGCTTGACCTTTCAAATAATAATTTTCATGGGTTCATTCCTCCAGCTTTTGGAAATTTATCTGATCTTGAAATTCTAGATTTGTCTTCAAATAAGTTCCAAGGGCAGATTCCACCAGAATTGGGTGGCCTCAGAAACCTTAAATCATTGAACCTTTCCAGCAACTTGCTTGTGGGGAAAGTACCACAGGAACTTCGTGACCTAGAGAAATTGCAGGAGCTTCAAATCTCTAGTAATCAATTGAGTGGTTCATTACCTTCCTGGGTGGGGAATTTGACTAATCTAAGAGTTCTTGCAGCCTACGAGAACGAGCTAGATGGTAGGATTCCTGATAATCTTGGCTCGGCTTCTGAGCTTCGAATACTTAACATGCATTCGAACCAGCTTGAAGGTCCTATTCCAGCAGGCATTTTTGCTCCGGGGAAGCTTGAAGTTCTGGTTCTGACCCAGAACAATCTGAGTGGTGATCTTCCTCAAGAAATTGGGAATTGCCAAGGCCTTTCCAACATTCGAATTGGCAACAATCGTCTTGTAGGTACTATTCCTAAGACCATTGGAAACATTAGCAGCCTTACCTACTTTGAAGCAGATAACAACAATTTTTCTGGTGAGATAATGTCACAGTTTTCAAATTGTTCCAATCTCACCCTCCTGAACTTAGCTTCTAATGGATTCAGCGGACCAATTCCACCGGAATTTGGACAGCTTATGAACCTGCAGGAATTGATTCTTTCCGGAAATAATCTATTTGGTGATATTCCAGAATCAGTTTTGAGGTGCAGGAATCTTAACAAGCTTGATATAAGCAATAACAGATTCAATGGAACTGTACCAAGTGAAATCTGCAAACTGTCACGGCTGCAATTCTTGCTATTGAGTCAGAATTCCCTTAGGGGAGAGATCCCTCATGAAATAGGAAACTGTGCAAAACTTCTTGAATTGCAAATGGGCAGTAACTATTTGACAGGAATTATTCCTCCTGAGATTGGTCACATTAGGAATTTGCAGATAGCTTTGAATTTGAGCTTCAATCATCTTCATGGATCACTGCCTCCTGAATTAGGAAGACTGGACAAACTCGTCTCTCTGGATGTCTCAAACAACCGGCTCTCAGGGAACATCCCAGCTGAGCTTAAGGGAATGTTGAGCTTGATAGAGGTTAACTTTTCAAATAATTTACTCACTGGCCCGGTCCCAACATTTGTCCCATTCCAAAAGAGTCCTAATTCAAGTTTCATGAGCAATAAAGGGCTTTGTGGAGAGCCATTGAACTCTTCATGTGGAGATGTTTATGGTGACCGCAACAACTACCATCACAGAGTTTCTTACAGAATCATACTTGCTGTAATAGGTTCTGGTTTGGCAGTTTTTATGTCAGTCACCGTAGTGGTGTTGCTGTTTATGATCAGAGAGAGGCAAGAAAAAGCGGCCAAAGATGCTGGGATTGCTGAAGATGAAACAAATAGCAAACCAACTATAATAGCGGGGAATGTCTTTGTTGAGAATCTAAGACAAGCAATAGATCTTGATGCTGTTGTTAAGGCGACCCTGAAAGATTCTAATAAGCTTAGCAGTGGAACTTTCAGTACAGTTTACGAGGCAGTCATGCCTTCTGGGATGGTCTTATCTGTAAGGAGACTCAAGTCCATGGACAAGACAATAATCCACCACCAAAACAAGATGATTAGAGAACTTGAGAGGCTGAGCAAACTGTGTCATGACAATCTGGTTCGACCCATTGGATATGTTATTTACGAAGATGTTGCTCTTCTCTTGCATCATTTTTTACCCAACGGAACATTGGCTCAGCTTCTTCATGAATCTACCAAGCAACCTGATTATCAACCTGACTGGCCAACTAGACTATCCATTGCCATTGGAGTGGCAGAAGGTCTGGCTTTTCTGCATCATCTAGCAATTATCCATCTTGACATTTCTTCTGGCAATGTTCTTTTGGATGCAAATTTCAAGCCTTTGCTCGGCGAGATCGAGATTTCAAAACTTCTTGATCCAACCCGAGGCACTGCAAGTATTAGCGCTGTTGCCGGTTCATTTGGTTACATACCACCAGAATATGCATATACAATGCAAGTCACTGCACCAGGAAATGTCTACAGCTATGGTGTAGTTCTGCTTGAGATCCTCACAACTCGACCACCAGTTGATGAGGATTTCGACGAAGGTGTAGATTTGGTGAAGTGGGTTCACAGTGCTCCAATAAGAGGGGAAACTCCAGAGCAGATATTGGATTCAAGGCTTAGCACAGTTTCCTTTGGTTGGAGGAAAGAAATGCTTGCTGCTCTGAAGGTTGCATTGCTCTGCACCGACACTACACCAGCAAAGCGACCAAAAATGAAGAAGGTAGTAGAAATGCTCCAAGAAATAAGGCAAAACTGA 2670 0.4285 MEIVCVLLYLVVAWYVSKSELVVVGAELQDQTVLLAINQELRVAGWDVNNSDYCSWRGVGCGNQSMVVKLDLSRTNLRGNVTLVSQLRALRLLDLSNNNFHGFIPPAFGNLSDLEILDLSSNKFQGQIPPELGGLRNLKSLNLSSNLLVGKVPQELRDLEKLQELQISSNQLSGSLPSWVGNLTNLRVLAAYENELDGRIPDNLGSASELRILNMHSNQLEGPIPAGIFAPGKLEVLVLTQNNLSGDLPQEIGNCQGLSNIRIGNNRLVGTIPKTIGNISSLTYFEADNNNFSGEIMSQFSNCSNLTLLNLASNGFSGPIPPEFGQLMNLQELILSGNNLFGDIPESVLRCRNLNKLDISNNRFNGTVPSEICKLSRLQFLLLSQNSLRGEIPHEIGNCAKLLELQMGSNYLTGIIPPEIGHIRNLQIALNLSFNHLHGSLPPELGRLDKLVSLDVSNNRLSGNIPAELKGMLSLIEVNFSNNLLTGPVPTFVPFQKSPNSSFMSNKGLCGEPLNSSCGDVYGDRNNYHHRVSYRIILAVIGSGLAVFMSVTVVVLLFMIRERQEKAAKDAGIAEDETNSKPTIIAGNVFVENLRQAIDLDAVVKATLKDSNKLSSGTFSTVYEAVMPSGMVLSVRRLKSMDKTIIHHQNKMIRELERLSKLCHDNLVRPIGYVIYEDVALLLHHFLPNGTLAQLLHESTKQPDYQPDWPTRLSIAIGVAEGLAFLHHLAIIHLDISSGNVLLDANFKPLLGEIEISKLLDPTRGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRPPVDEDFDEGVDLVKWVHSAPIRGETPEQILDSRLSTVSFGWRKEMLAALKVALLCTDTTPAKRPKMKKVVEMLQEIRQN 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3087 889 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 59 229 - -
Bisa07g3087 889 SUPERFAMILY L domain-like 196 513 - -
Bisa07g3087 889 Gene3D Transferase(Phosphotransferase) domain 1 687 889 - -
Bisa07g3087 889 SMART LRR_typ_2 159 182 IPR003591 -
Bisa07g3087 889 SMART LRR_typ_2 111 134 IPR003591 -
Bisa07g3087 889 SMART LRR_typ_2 87 110 IPR003591 -
Bisa07g3087 889 SMART LRR_typ_2 327 351 IPR003591 -
Bisa07g3087 889 SMART LRR_typ_2 135 158 IPR003591 -
Bisa07g3087 889 SMART LRR_typ_2 448 471 IPR003591 -
Bisa07g3087 889 SMART LRR_typ_2 183 207 IPR003591 -
Bisa07g3087 889 SMART LRR_typ_2 375 399 IPR003591 -
Bisa07g3087 889 SMART LRR_typ_2 208 231 IPR003591 -
Bisa07g3087 889 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 578 686 - -
Bisa07g3087 889 Gene3D Ribonuclease Inhibitor 175 275 IPR032675 -
Bisa07g3087 889 Gene3D Ribonuclease Inhibitor 276 518 IPR032675 -
Bisa07g3087 889 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 687 889 - -
Bisa07g3087 889 Pfam Leucine rich repeat N-terminal domain 36 61 IPR013210 -
Bisa07g3087 889 CDD STKc_IRAK 614 886 - -
Bisa07g3087 889 ProSitePatterns Tyrosine protein kinases specific active-site signature. 731 743 IPR008266 GO:0004672|GO:0006468
Bisa07g3087 889 Pfam Protein tyrosine and serine/threonine kinase 611 883 IPR001245 GO:0004672|GO:0006468
Bisa07g3087 889 Gene3D Phosphorylase Kinase; domain 1 572 686 - -
Bisa07g3087 889 Pfam Leucine rich repeat 329 388 IPR001611 GO:0005515
Bisa07g3087 889 Pfam Leucine rich repeat 134 172 IPR001611 GO:0005515
Bisa07g3087 889 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 230 521 - -
Bisa07g3087 889 Pfam Leucine Rich Repeat 90 111 IPR001611 GO:0005515
Bisa07g3087 889 SUPERFAMILY L domain-like 44 296 - -
Bisa07g3087 889 Gene3D Ribonuclease Inhibitor 27 174 IPR032675 -
Bisa07g3087 889 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 281 887 - -
Bisa07g3087 889 ProSiteProfiles Protein kinase domain profile. 608 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g3087 889 SUPERFAMILY Protein kinase-like (PK-like) 608 886 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3087 Bisa-ChrBisa07 65004918 65007878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3087 1 888 Receptor kinase-like Gene Family AT2G41820 72.615 0.0 1302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa07g3087 PK_Tyr_Ser-Thr 3.5e-26 CL0016