Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3077 ATGGAGGAGGTGAAGCAGAAAGAGACGTCCGAACATGGAAGGAAGGCGAACCCACCGCCGTTCTTGTTGAAGACGCACATGCTGGTGGAGGATCCGGCCACCGATGATGTCATATCGTGGAACGCCGACGGCACGGCGTTTGTGGTGTGGCAGCCGGCGGAGTTTGCCCGCGACCTCCTTCCCACTCTCTTCAAGCACAGCAATTTTTCTAGCTTTGTTCGCCAGCTCAATACCTATGGATTTCGTAAGGTTGCGACGAGCAGATGGGAATTCTGCAACAACCGGTTCAGGAAGGGAGAGAAAGAAGTGCTGTGTGAGATTCGAAGAAGAAAGGCTTGGGCTAGCAAGCAACAACAACATCCATCGGCCCAGGCCCAGGCCCATCATCATCATCAGGAATATTCGGATGAAGACCAAAGGTCTTCTTCAACCTCTTCGTCGTCTGGGTTGTCCAGTCTTGTGGACGAGAACAAGAGGCTGAAGAAAGAGAATGGGGTGTTGAGCTCAGAGCTCATCGCCATGAAAAGGAAGTGCAAGGAGCTGCTTGAGCTGGTGGCCACACACGCAGGGAAGAAGGAGGAAGATGAAGACGAGAGGCCTATGTTATTTGGAGTGAGACTGGACGTCGTTCATCAAGGAGAGAAGGATTTCAAGAGAAACAGAACTCGTGAGATCAGTGAGAGCTCAAGCATTTTGCTCTCTCAATCATGCAAATAG 717 0.5146 MEEVKQKETSEHGRKANPPPFLLKTHMLVEDPATDDVISWNADGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNNRFRKGEKEVLCEIRRRKAWASKQQQHPSAQAQAHHHHQEYSDEDQRSSSTSSSSGLSSLVDENKRLKKENGVLSSELIAMKRKCKELLELVATHAGKKEEDEDERPMLFGVRLDVVHQGEKDFKRNRTREISESSSILLSQSCK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3077 238 SUPERFAMILY "Winged helix" DNA-binding domain 17 110 IPR036390 -
Bisa07g3077 238 MobiDBLite consensus disorder prediction 1 20 - -
Bisa07g3077 238 MobiDBLite consensus disorder prediction 115 155 - -
Bisa07g3077 238 FunFam Heat stress transcription factor B-4 13 111 - -
Bisa07g3077 238 SMART hsfneu3 17 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g3077 238 Coils Coil 150 170 - -
Bisa07g3077 238 PRINTS Heat shock factor (HSF) domain signature 59 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g3077 238 PRINTS Heat shock factor (HSF) domain signature 21 44 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g3077 238 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g3077 238 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 11 185 IPR027725 -
Bisa07g3077 238 ProSitePatterns HSF-type DNA-binding domain signature. 60 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g3077 238 MobiDBLite consensus disorder prediction 139 154 - -
Bisa07g3077 238 Pfam HSF-type DNA-binding 21 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g3077 238 Gene3D - 12 112 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3077 Bisa-ChrBisa07 64907642 64909163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3077 18 208 HSF AT2G41690 56.522 1.05e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa07g3077 HSF_DNA-bind 5.7e-31 CL0123