Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3070 ATGGAGACTTTGTTGAAGGATTTCGAGCTAGAGCACAAGAATCCGTCCAGGGAAGCCTTGAGGAGATGGAGATCCGCCGTCAGGCTGGTCAAGAACCCTCGGAGAAGGTTCCGTATGGTCGCCGATCTCGATAAACGTTCCGAAGCTGAGAGGATCAAGCAGAAAATCCAGGAAACTATTCGGATTGCTCTCTATGTTCAAAAGGCGGCATTGCAGTTTATTGATGCTGGAGGTCGAATTGATTACAGTCTGTCAGAAGAGGCAAGAGAAGCTGGTTTTGGTATTAATCCGGATGACATTGCCTCTATTGTTCGTGGCCATGATAATAAGAAATTGAGAATAATTGGAGGAGTTGATGGGGTTGCTTCAAAATTATCTGTCTCAGTCGATGAAGGTGTTAGTGAAGACAGTATAAACACCAGGCATCAAATTTATGGGTTCAACCGTTATACAGAGAAACCTGCTAGAACCTTCCTGATGTTTGTGTGGGAAGCACTGCATGACTTGACTCTAATCATTCTCATGGTTTGTGCTATAGTGTCAATAGGTGTAGGCGTTGCCACTGAAGGGTGGCCGAAGGGTGTCTATGATGGTCTGGGAATCATACTTAGTATATTCTTAGTTGTCATTGTTACTGCTGTTAGTGACTATCAGCAATCGTTGCAGTTCAGGGATTTGGACAAAGAGAAGAAAAAGATCTTTGTTCAGGTTACCAGGAACGGCAAAAGGCAGAAGGTCTCAATTTATGATCTGGTAGTGGGAGATATTGTTCATTTATCAACTGGGGATCAAGTTCCAGCTGATGGGATTTTCATATGGGGATACAACTTGCTAATCGACGAATCGAGTTTGTCAGGTGAGAGCGAACCAGTATATGTAAATGAAGAAAAACCTTTCCTTCTTTCAGGAACCAAAGTGCAAGATGGTCAGGGAAAGATGTTAGTGACAACTGTTGGCATGAGGACTGAATGGGGAAAGTTGATGGAAACTCTAAACGAGGGGGGAGAGGATGAGACCCCATTGCAGGTGAAATTGAATGGAGTTGCTACTATTATCGGTAAGATTGGTTTGGCTTTTGCTGTGGTAACATTTTTAGTGTTGACAATAAGGTTTCTAGTGGAAAAAGCGGTGCTCGGTGAGTTTACTAATTGGTCTTCAAGTGATGCAATGAGGATGCTGGACTTCTTTGCTATCGCGGTTACCATCATAGTTGTTGCAGTTCCCGAAGGCTTACCATTGGCTGTAACACTCAGCCTTGCTTTTGCAATGAAAAAATTAATGAATGAGAGAGCACTCGTGAGGCATCTTACTGCATGTGAGACAATGGGTTCGGCCAGTTGCATTTGCTCTGATAAAACAGGGACATTGACAACTAACCATATGGTGGTTGATAAAATATGGATATGTGAAAAAGAAACGAAGATTAAAGGTAAAGAGAGTGTAGACAAACTGAAAACCGAGATATCTGAAGAAGTTCTGAGCATCTTTTTCCAGGCGATATTTCAAAACACTTCTTCTGAAGTAGTCAAGGATAAGGACGGGAAGAACACAATATTAGGAACGCCAACAGAATCAGCACTAATGGAATTTGGCTTGCTTTTGGGCGGTGATTTTGATGCTCAGCGCAGAGAGTACAAAATAATTAAGATTGAGCCTTTCAATTCAGTGCGGAAGAAGATGTCTGTTCTGGTGGGTCTTCCCGATAGAGGGGTGCGAGCTTTTTGCAAAGGTGCATCGGAAATAGTATTAAAAATGTGTGACAAAATTATTGATCGCAATGGAAATCCTATTGATCTTCCTGAAGACCATGCAAATAATGTCTCTGATGTAATAAATGGTTTTGCCTCTGAAGCTTTAAGGACTCTTTGTTTGGCTGTCAAAGATATAAATGATACCCAAGGTGAAGCCAACATCCCTGATAATGGCTATACATTGATAGCCATTGTAGGAATCAAGGATCCTGTGCGCCCTGGGGTCAAAGAAGCTGTTCAAACTTGTTTAAAGGCTGGAATAACAGTTCGTATGGTCACTGGTGATAATATATATACAGCTAGGGCTATTGCTAAAGAATGTGGTATACTCACTGAAGGCGGTGTAGCTATAGAAGGATCAGAATTTCGAAACCTAACTCCTGAGCAAATGAAGGATATCATACCGAGAATTCAGGTAATGGCACGATCCTTACCGCTTGACAAACATACCTTAGTAACCAATTTGCGAAATATGTTCGGCGAGGTTGTTGCTGTTACTGGCGATGGAACCAATGATGCTCCTGCATTGCACGAGTCTGACATAGGACTTGCCATGGGCATAGCTGGAACCGAGGTTGCGAAAGAGAACGCTGATGTTATTATAATGGATGATAACTTCACAACTATTGTCAATGTGGCCAAATGGGGACGGGCAGTGTACATAAACATTCAAAAATTTGTGCAGTTTCAATTAACAGTCAATGTTGTTGCTTTGGTCATCAACTTTGTTTCTGCATGCATCACAGGATCTGCTCCACTAACAGCTGTACAGTTGCTTTGGGTCAACTTGATCATGGACACTCTGGGTGCACTGGCCCTGGCCACTGAATCACCTAACGATGGACTCATGAAAAGGCTCCCAGTTGGAAAGGGAACAAGCTTTATCACCAAAGCCATGTGGAGGAATATAATTGGTCAAAGTATATATCAACTAATTGTCCTTGCAGTTCTCAATTTTGATGGTAAGAACCTACTGAGACTTGGTGGTTCAGATGCAACTAGTGTCCTCAACACTTTGATATTCAACTCCTTTGTCTTCTGCCAGGTTTTTAATGAGATCAACAGCCGAGACATAGAAAAGATAAACATATTCAGAGGCATGTTTCACAGTTGGATATTTTTAGCAGTAATCTCTTGCACAGTCGCATTTCAAGTAATCATAGTGGAGTTCCTGGGAACTTTTGCCAGCACTGTGCCTCTGAACTGGCAACTCTGGTTGCTGTGTGTGTTAATTGGAGCCGTAAGCATGCCTATAGCTGCTGTCCTCAAGTGCATTCCAGTTGAAAAAGGCGCTTCTAAACACCATGATGGTTACGAGGCATTGCCTTCTGGTCCCGAGGTCGCATTAAATGTGGGAAGATGGCCCTCTTAA 3123 0.4256 METLLKDFELEHKNPSREALRRWRSAVRLVKNPRRRFRMVADLDKRSEAERIKQKIQETIRIALYVQKAALQFIDAGGRIDYSLSEEAREAGFGINPDDIASIVRGHDNKKLRIIGGVDGVASKLSVSVDEGVSEDSINTRHQIYGFNRYTEKPARTFLMFVWEALHDLTLIILMVCAIVSIGVGVATEGWPKGVYDGLGIILSIFLVVIVTAVSDYQQSLQFRDLDKEKKKIFVQVTRNGKRQKVSIYDLVVGDIVHLSTGDQVPADGIFIWGYNLLIDESSLSGESEPVYVNEEKPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIGLAFAVVTFLVLTIRFLVEKAVLGEFTNWSSSDAMRMLDFFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNERALVRHLTACETMGSASCICSDKTGTLTTNHMVVDKIWICEKETKIKGKESVDKLKTEISEEVLSIFFQAIFQNTSSEVVKDKDGKNTILGTPTESALMEFGLLLGGDFDAQRREYKIIKIEPFNSVRKKMSVLVGLPDRGVRAFCKGASEIVLKMCDKIIDRNGNPIDLPEDHANNVSDVINGFASEALRTLCLAVKDINDTQGEANIPDNGYTLIAIVGIKDPVRPGVKEAVQTCLKAGITVRMVTGDNIYTARAIAKECGILTEGGVAIEGSEFRNLTPEQMKDIIPRIQVMARSLPLDKHTLVTNLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVAKWGRAVYINIQKFVQFQLTVNVVALVINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATESPNDGLMKRLPVGKGTSFITKAMWRNIIGQSIYQLIVLAVLNFDGKNLLRLGGSDATSVLNTLIFNSFVFCQVFNEINSRDIEKINIFRGMFHSWIFLAVISCTVAFQVIIVEFLGTFASTVPLNWQLWLLCVLIGAVSMPIAAVLKCIPVEKGASKHHDGYEALPSGPEVALNVGRWPS 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3070 1040 SUPERFAMILY Calcium ATPase, transduction domain A 234 330 IPR008250 -
Bisa07g3070 1040 NCBIfam HAD-IC family P-type ATPase 715 838 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa07g3070 1040 NCBIfam HAD-IC family P-type ATPase 201 473 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa07g3070 1040 FunFam Calcium-transporting ATPase 211 332 - -
Bisa07g3070 1040 SFLD p-type atpase 431 802 IPR044492 -
Bisa07g3070 1040 Gene3D - 459 654 IPR023299 GO:0000166
Bisa07g3070 1040 FunFam Calcium-transporting ATPase 15 75 - -
Bisa07g3070 1040 Pfam E1-E2 ATPase 234 428 - -
Bisa07g3070 1040 NCBIfam calcium-translocating P-type ATPase, PMCA-type 108 1012 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bisa07g3070 1040 SUPERFAMILY HAD-like 448 855 IPR036412 -
Bisa07g3070 1040 Gene3D - 164 1009 - -
Bisa07g3070 1040 Gene3D - 446 795 IPR023214 -
Bisa07g3070 1040 Gene3D - 132 332 - -
Bisa07g3070 1040 CDD P-type_ATPase_Ca_PMCA-like 138 883 - -
Bisa07g3070 1040 FunFam Calcium-transporting ATPase 647 795 - -
Bisa07g3070 1040 Gene3D - 15 76 - -
Bisa07g3070 1040 SFLD C1.7: P-type atpase like 431 802 - -
Bisa07g3070 1040 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 455 659 IPR023299 GO:0000166
Bisa07g3070 1040 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1011 IPR023298 -
Bisa07g3070 1040 PANTHER CATION TRANSPORTING ATPASE 84 1011 - -
Bisa07g3070 1040 FunFam Calcium-transporting ATPase 459 654 - -
Bisa07g3070 1040 Pfam Cation transporter/ATPase, N-terminus 117 181 IPR004014 -
Bisa07g3070 1040 ProSitePatterns E1-E2 ATPases phosphorylation site. 451 457 IPR018303 -
Bisa07g3070 1040 PRINTS H+-transporting ATPase (proton pump) signature 750 766 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa07g3070 1040 PRINTS H+-transporting ATPase (proton pump) signature 782 807 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa07g3070 1040 PRINTS H+-transporting ATPase (proton pump) signature 607 625 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa07g3070 1040 FunFam Calcium-transporting ATPase 767 1013 - -
Bisa07g3070 1040 Pfam Cation transport ATPase (P-type) 505 589 - -
Bisa07g3070 1040 PRINTS P-type cation-transporting ATPase superfamily signature 669 679 - -
Bisa07g3070 1040 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Bisa07g3070 1040 PRINTS P-type cation-transporting ATPase superfamily signature 647 658 - -
Bisa07g3070 1040 PRINTS P-type cation-transporting ATPase superfamily signature 449 463 - -
Bisa07g3070 1040 PRINTS P-type cation-transporting ATPase superfamily signature 774 786 - -
Bisa07g3070 1040 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Bisa07g3070 1040 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Bisa07g3070 1040 SMART Cation_ATPase_N_a_2 114 186 IPR004014 -
Bisa07g3070 1040 Pfam Cation transporting ATPase, C-terminus 835 1008 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3070 Bisa-ChrBisa07 64702028 64709235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3070 56 1029 Primary Pumps ATPases AT3G57330 75.257 0.0 1515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2396 03 35488897 35505342 Bisa07g3070 07 64702028 64709235 CCT
Bisa07g3070 07 64702028 64709235 Bisa07g3070 07 64702028 64709235 ECH