Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3035 ATGTCCCTTGAAGACTCTCTGAGATCTCTATCACTGGACTACCTCAACCTCCTCATCAACGGCCAAGCCTTCAGTGACGTCACCTTCAGCGTGGAGGGTCGTCTCGTCCACGCTCATCGCTGCATCCTCGCAGCCCGCAGCCTCTTCTTCCGGAAGTTCTTCTGCGCCCCGGAGCCGCCGTCGGGCCTCGACGCCTCCGCCTCTCGGGCCAACTCCGCCTCCCGGTCTCCCGTCATTCCCGTGAATTCCGTCGGCTACGAGGTGTTCTTGCTGCTTCTCCAGTTCTTGTACAGTGGGCAGGTCTCTATTGTGCCTCAGAAGCACGAGCCGAGGTCCAATTGCGGCGAGCGAGGCTGCTGGCACACCCATTGCACCTCCGCCGTTGATCTTGCCCTCGACACCCTCGCTGCCGCTAGATCCTTTGGCGTTGAACAGCTTGCATTGCTCACTCAGAAACAACTAGCGAGCATGGTAGAGAAGGCCTCCATCGAAGATGTAATGAAAGTGCTGGTAGCATCAAGAAAGCAAGACATGCAACAGCTCTGGGCCACCTGCTCCCACCTCGTCGCCAAGTCAGGTCTTCCCCCTGAAGTCCTCGCCAAGCACCTCCCCATTGACGTCGTCGCCAAGATCGAAGAGATTCGCCTCAAGTCCTCCTTCGCCCGCCGCTCCTTATTGCCCTACCACCACCGCGACCTCGCTGCTGCCGCCGCAGCCGACCTGGAGGACCAGAAAATCCGGCGAATGAAGAAGGCACTCGACTCCTCCGATGTGGAACTCGTGAAACTCATGGTAATGGGGGAAGGCCTGAATCTGGACGAAGCACTGGCCTTGCACTACGCCGTAGAGAATTGCAGCCGAGAAGTGGTGAAGGCGCTGCTGGAGCTCGGTGCGGTCGACGTCAACCACCCGGCGGGGCCTGCCGGGAAGACCCCGCTACACATTGCGGCGGAGATGGTGTCGCCGGACATGGTGGCGGTGCTGCTGGACCACCATGCTGACCCTAATGTCCGAATGGTGGATGGAGTGACCCCACTGGACATCCTCAGAACCCTAACCTCTGATTTCCTGTTCAAAGGGGCGGTGCCTGGGCTAACCCATATCGAACCCAACAAGCTGAGGCTGTGCTTGGAGCTAGTCCAATCGGCGGCTCTTGTAATATCTCGAGAAGAAGGCAATGCCAATAATAATAATAATCCTCCTACTTCAACCGCCATTTACCCCCCATTGAGCGAGGACCATAGCAGTGGGAGCAGCAGCAACCTCAATCTGGTGTATCTGAATCTTGGTGCGGCGGCTTCGGCTCACATGGTTTCGAGATTGGACGGAGACGACGATGGGCAGAGGGAGGCCATGAACCGCCACGCTTCGCAAGGAGGTAGATGTGACCCCATAATGTACCACCACCACCACTCTCATGACTTCTAG 1428 0.5798 MSLEDSLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCAPEPPSGLDASASRANSASRSPVIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRSNCGERGCWHTHCTSAVDLALDTLAAARSFGVEQLALLTQKQLASMVEKASIEDVMKVLVASRKQDMQQLWATCSHLVAKSGLPPEVLAKHLPIDVVAKIEEIRLKSSFARRSLLPYHHRDLAAAAAADLEDQKIRRMKKALDSSDVELVKLMVMGEGLNLDEALALHYAVENCSREVVKALLELGAVDVNHPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRMVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVISREEGNANNNNNPPTSTAIYPPLSEDHSSGSSSNLNLVYLNLGAAASAHMVSRLDGDDDGQREAMNRHASQGGRCDPIMYHHHHSHDF 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3035 475 CDD BTB_POZ_NPR_plant 8 158 - -
Bisa07g3035 475 Pfam Domain of unknown function (DUF3420) 193 249 IPR024228 -
Bisa07g3035 475 MobiDBLite consensus disorder prediction 391 414 - -
Bisa07g3035 475 MobiDBLite consensus disorder prediction 441 465 - -
Bisa07g3035 475 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 470 IPR044284 GO:0099402
Bisa07g3035 475 Pfam Ankyrin repeats (3 copies) 256 338 IPR002110 GO:0005515
Bisa07g3035 475 Pfam BTB/POZ domain 16 106 IPR000210 GO:0005515
Bisa07g3035 475 ProSiteProfiles BTB domain profile. 25 105 IPR000210 GO:0005515
Bisa07g3035 475 FunFam regulatory protein NPR5 isoform X1 4 191 - -
Bisa07g3035 475 SMART ANK_2a 273 303 IPR002110 GO:0005515
Bisa07g3035 475 SMART ANK_2a 308 337 IPR002110 GO:0005515
Bisa07g3035 475 Gene3D Potassium Channel Kv1.1; Chain A 4 191 IPR011333 -
Bisa07g3035 475 Gene3D - 234 356 IPR036770 -
Bisa07g3035 475 SUPERFAMILY POZ domain 9 187 IPR011333 -
Bisa07g3035 475 ProSiteProfiles Ankyrin repeat region circular profile. 308 338 - -
Bisa07g3035 475 SMART BTB_4 25 158 IPR000210 GO:0005515
Bisa07g3035 475 SUPERFAMILY Ankyrin repeat 267 351 IPR036770 -
Bisa07g3035 475 FunFam regulatory protein NPR5 isoform X2 239 356 - -
Bisa07g3035 475 ProSiteProfiles Ankyrin repeat profile. 308 340 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3035 Bisa-ChrBisa07 64213312 64215718 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bisa07g3035 BTB 5.2e-15 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2471 03 37003327 37005574 Bisa07g3035 07 64213312 64215718 CCT
Bisa07g3035 07 64213312 64215718 Bisa07g3035 07 64213312 64215718 ECH