Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3023 ATGTTGGCATTATCCCCTCCTGTGTTCTCACCCATTGAGTGGCCCTTGGATGAGCCGACGAGTACTCACAATACTCAGAACTTGACATACAGAGACCTAAGTGGTGATCATGTTGAGTTTATTTCTGAACCTCTTCATCATCAGGTTGGTGTGGAGGAGTTTGAGAGGTCTGCGCCAATATCCCCTGGTAGCAGCGACCCTAACATGGTCAAGAAGCTCAACCATAATGCCAGCGAACGTGATCGTCGCAAGAAGATCAATAGCATGTATTCCTCACTTCGTTCCATGCTTCCTTTGGCTGATCAAACGAAAAAATTAAGCATTCCAGCAACAATTTCACGAGTGCTGAAGTACATCCCGGAGTTACAGCAGCAAGTGGAAGGACTTATTAAGAAAAAGGAGGAGCTTTTGTTGAGAATCTCCCGCCAAGGAGATGCAGCAACAAGCAAAGACTCTCGAACCAAAACTGGGCTTCAAAACTCTGCTTGTGTAGTTTCAACAAGTAGGCTCAGTGAGAGCGAGGCCCTCATTCAGATCTCCTCTGATAAGCTCCACAAAACTCCACTGTCTCAGATCTTGCTTTGCTTAGAAAAACAAGGCCTTTTACTGCTAAACGCTTCCTCCTTCGAGACCTTTGGACACAGGGTCTTCTATAACTTGCATTTCCAGGTGGAAAGAACATATAGATTAGAATCCGACATGCTGAGCGAGAAGATTTTGTCAATATATGAGAAGAAGGAGGGGGGTTTTCAGTGTTTCTAA 762 0.4501 MLALSPPVFSPIEWPLDEPTSTHNTQNLTYRDLSGDHVEFISEPLHHQVGVEEFERSAPISPGSSDPNMVKKLNHNASERDRRKKINSMYSSLRSMLPLADQTKKLSIPATISRVLKYIPELQQQVEGLIKKKEELLLRISRQGDAATSKDSRTKTGLQNSACVVSTSRLSESEALIQISSDKLHKTPLSQILLCLEKQGLLLLNASSFETFGHRVFYNLHFQVERTYRLESDMLSEKILSIYEKKEGGFQCF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3023 253 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 67 240 - -
Bisa07g3023 253 Coils Coil 119 139 - -
Bisa07g3023 253 FunFam Transcription factor ORG2 66 151 - -
Bisa07g3023 253 CDD bHLH_AtORG2_like 71 143 - -
Bisa07g3023 253 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 140 IPR036638 GO:0046983
Bisa07g3023 253 Gene3D - 64 150 IPR036638 GO:0046983
Bisa07g3023 253 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 122 IPR011598 GO:0046983
Bisa07g3023 253 Pfam Helix-loop-helix DNA-binding domain 71 123 IPR011598 GO:0046983
Bisa07g3023 253 SMART finulus 76 128 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3023 1 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 44.015 9.91e-63 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa07g3023 HLH 1.7e-12 No_clan