Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2999 ATGGGACTGTGCCATGGAAAACCCATTGAAATCCCAGAAACGCAAGTAGGAGAAAACCCAATATTTTGCGATGACAAAGACGGGGTTCCGAATTCGCAGGGTAGAAAATCCTCCAACTTCCCCTTTTACAGCCCGAGTCCCTTACCGAGCCTCTTCAAGAACTCACCTGCGAACTCCAGCGTGAGCTCCACTCCTCTGCGCATCTTCAAGCGCCCATTTCCTCCTCCTTCGCCGGCCAAGCACATTCGCTCGTTGCTTGCTCGAAGGCATGGTTCCGTGAAGCCAAACGAGGCTTCCATCCCCGAAGGAAGTGAATGCGAGGTTGGACTTGATAAGAGTTTCGGCTTCTCGAAGCAGTTCCTGGCTCTCTATGAGGTTGGAGAAGAGGTGGGACGTGGCCATTTCGGGTACACTTGCTGTGCCAAGGGAAAGAAAGGCAGCTTGAAGGGGCAGGATGTGGCTGTCAAAGTCATTCCAAAATCCAAGATGACAACAGCTATTGCTATAGAGGATGTGAGGAGAGAAGTGAAGATATTGCGGGCTTTAACAGGACATAAGAACCTGGTGCAGTTCTATGAGGCCTATGAAGATGACGACAATGTTTATATGGTTATGGAGCTATGCAAAGGAGGTGAACTACTAGACAGGATACTTTCCAGGGGTGGAAAGTACTCTGAAGAGGACGCCAAGGTTGTTATAATTCAGATATTAAGTGTGGTGGCTTTCTGTCATCTTCAGGGTGTTGTTCATCGTGATCTCAAGCCAGAGAATTTTCTTTTTACTTCTAAGGATGAAAACTCCACTCTGAAGGCCATTGATTTTGGACTCTCTGACTATGTAAAGCCAGATGAAAGGTTGAATGACATTGTGGGAAGTGCATATTATGTAGCACCCGAAGTTTTGCATAGATCTTATGGGACTGAAGCAGATATGTGGAGCATCGGTGTAATTGCTTATATTCTTTTATGTGGAAGCCGACCCTTTTGGGCCCGGACAGAATCTGGCATATTTCGAACTGTCCTGAAGGCAGATCCTAGTTTTGATGAAGCTCCTTGGCCTTCTCTATCAGCTGATGCAGTAGATTTTGTAAAGAGGCTATTGAATAAGGATTATCGTAAGAGATTAACTGCAGCTCAGGCTCTGTGTCATCCATGGCTGGCTAATCATCATGATCATATGAAGATACCTCTGGATGTTATAATCCCTAAGCTTGTTAAAGCTTACACATGCTCGTCTTCTTTACGCAAATCAGCATTAGCGGCTCTTGCAAAGACATTAACAGTACCTCAGCTAGCTTATCTCAGAGAACAATTTACCCTGTTAGGGCCAAACAAAAATGGATCTATCTCTGTGCAGAACTTTAAGACGGCGTTTTCAAGGAGCTCCACCAATGCCTCAAAGGATTCACGGGTCTTGGATTATGTAAACATGATTAGTTCTATCCAATATAGGAAATTAGATTTTGAGGAATTTTGTGCTGCTGCTATAAGCGTGCACCAACTAGAGGGAATGGAGAGCTGGGAGCAACATGCAAGGCGAGCATACGAGCTATTTGAAAAGCGTGGAAACAGAACAATTATGATCGAAGAGCTCGCCTCAGAACTTGGGCTTAGCCCATCAGTACCTGTTCATGTGGTACTCCAAGATTGGATAAGACACTCAGATGGGAAGCTCAGTTTCTTGGGGTTTGTCAGACTTCTGCATGGGGTTTCTTCTCGCACATTTCAGAAACCTTAG 1737 0.4537 MGLCHGKPIEIPETQVGENPIFCDDKDGVPNSQGRKSSNFPFYSPSPLPSLFKNSPANSSVSSTPLRIFKRPFPPPSPAKHIRSLLARRHGSVKPNEASIPEGSECEVGLDKSFGFSKQFLALYEVGEEVGRGHFGYTCCAKGKKGSLKGQDVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDDNVYMVMELCKGGELLDRILSRGGKYSEEDAKVVIIQILSVVAFCHLQGVVHRDLKPENFLFTSKDENSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRTVLKADPSFDEAPWPSLSADAVDFVKRLLNKDYRKRLTAAQALCHPWLANHHDHMKIPLDVIIPKLVKAYTCSSSLRKSALAALAKTLTVPQLAYLREQFTLLGPNKNGSISVQNFKTAFSRSSTNASKDSRVLDYVNMISSIQYRKLDFEEFCAAAISVHQLEGMESWEQHARRAYELFEKRGNRTIMIEELASELGLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTFQKP 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2999 578 PANTHER SERINE/THREONINE-PROTEIN KINASE 111 554 - -
Bisa07g2999 578 Gene3D Transferase(Phosphotransferase) domain 1 214 407 - -
Bisa07g2999 578 FunFam Calcium-dependent protein kinase SK5 296 391 - -
Bisa07g2999 578 SMART serkin_6 124 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2999 578 Gene3D - 408 569 - -
Bisa07g2999 578 SUPERFAMILY Protein kinase-like (PK-like) 124 451 IPR011009 -
Bisa07g2999 578 ProSitePatterns Protein kinases ATP-binding region signature. 130 156 IPR017441 GO:0005524
Bisa07g2999 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Bisa07g2999 578 FunFam CDPK-related kinase 3 116 288 - -
Bisa07g2999 578 Pfam Protein kinase domain 124 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2999 578 ProSiteProfiles EF-hand calcium-binding domain profile. 429 464 IPR002048 GO:0005509
Bisa07g2999 578 SUPERFAMILY EF-hand 415 569 IPR011992 -
Bisa07g2999 578 Gene3D Phosphorylase Kinase; domain 1 117 213 - -
Bisa07g2999 578 FunFam CDPK-related kinase 1 117 212 - -
Bisa07g2999 578 MobiDBLite consensus disorder prediction 15 40 - -
Bisa07g2999 578 CDD STKc_CAMK 124 385 - -
Bisa07g2999 578 ProSiteProfiles Protein kinase domain profile. 124 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2999 578 FunFam CDPK-related kinase 1 424 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2999 Bisa-ChrBisa07 63441173 63445294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2999 31 576 EF-hand Containing Proteins AT3G50530 70.769 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa07g2999 Pkinase 9.8e-70 CL0016