Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2992 ATGAAATCCAAGAGCCCTGAGCAATGGAGGGAATACTTTGAGAGCGGGAACTGTAGCATCTATCAGATTATATTCCATGCCATAAGAGTGGCTGCTGAGGATAACCCAGAGGAGTTCAAGCTTCGCAGAAAGCAGATTGTTGAGAGACTCTACTCCTGCAAATTCACTGGCTGCTGTAACTCTGCTGATCAAACATTCCTAGATGTTCAGAGCACCCTCACTCGAGTCTTCAACGACTGTAAAAAAACATGTGCTAATAACACAGCTAAGCTCCATGCCCATGTCAATGCTGTGGGTTCCGAAGGGACTACTGATCATCATGTTGATGAATTGGGACATAAGATTGAAGATGATCGCGACAACATTCGTCATGTTTTGCAGATTAAGGAGGAGCTTGAGAACAATGACGAGCTGACGGAGAAAGAGATCTATGAGTCATTGAGGAAGCTGCAATTGATGGTTCAATCAGTTGATGTTTTAGAGGCCACAAAGATAGGAAGAACAATAAGTGACCTTCAAAAGCATTGGTCGAGGCAGATTAGTCTGTTAGCAAGGAATATCGCTGATCAGTGGAAGGCAATGATAGTGGAGTTGGTGGATAGATCAGCAGAAACTGCAGAAAGATCTAAAAAGCCTGAGTCACCCCTTGTTCTTGAAGAATGGCGAGAATTTCCTTCTGCTGAATTTGTTCCTGAACCTCCAGTCGGGTTTTCAGAGAGGAATGCTGAAACAGAAAACGAGACAGAAGTGAAGAAGGAATGGTGCATGAAGCGAGAGAAAGTAAAGCAAGAAACCGCTGAGAAGTTATCAGACTGCAAGTATGACAGACCTTCCAACAAGAGCCATGAGATTGAAAAGATTCGAGGAATGCAGAGAAACCCTGTATCCAACAGAAGCCATGATATTGAAAAGATTCGAGGATTACAGAGAAAGACTGTGTCAGGAAACAGAACAAAACTGGAGGTGCAGCTCATTGAGGATGAAGAATTTATGACGCCCATAAACCGCCAAAAGGTAAAAGGAAGGCAAGATTCCATTCCTCAGAGACCAAATCCCAAACCTCCAAAGACTGAACATACCTCAGACAGAAACATAAAACCAAGAGTGAAGAAGGAGGTTCAGAATCACATGGAGATTGGTAAGAAGAAGGACAAGTTCACAGGTCATGAAACACCAAATATCAATGCAGTTCTTAAAAACGCACGCGAGGCGTGGGGTGATGATAGAGCAATGGAGCAAAAACTGGAAAGCACAAAGAGAAAGCTTCAAGAGGGATATCAAGCTCATGAGAGAGGTTTGTGCTTGCAGTTGCATGCTCTGTCCATAACTCCATATACAAGTCTTTCTGTGTTTGGTTCTGGGTATTACTGGTTGATGACTGGTGCCGTATGTATCCAAACAGCTAAAAGGAACATCCAGATAATTCCGGAATTGCGTGATCTTCCCAAACAAACATCTGGCCGCGCCCGCAGATTCTCACGCTCCAATTTCAGGAAACCAACTCGGATGCTCTGA 1515 0.4376 MKSKSPEQWREYFESGNCSIYQIIFHAIRVAAEDNPEEFKLRRKQIVERLYSCKFTGCCNSADQTFLDVQSTLTRVFNDCKKTCANNTAKLHAHVNAVGSEGTTDHHVDELGHKIEDDRDNIRHVLQIKEELENNDELTEKEIYESLRKLQLMVQSVDVLEATKIGRTISDLQKHWSRQISLLARNIADQWKAMIVELVDRSAETAERSKKPESPLVLEEWREFPSAEFVPEPPVGFSERNAETENETEVKKEWCMKREKVKQETAEKLSDCKYDRPSNKSHEIEKIRGMQRNPVSNRSHDIEKIRGLQRKTVSGNRTKLEVQLIEDEEFMTPINRQKVKGRQDSIPQRPNPKPPKTEHTSDRNIKPRVKKEVQNHMEIGKKKDKFTGHETPNINAVLKNAREAWGDDRAMEQKLESTKRKLQEGYQAHERGLCLQLHALSITPYTSLSVFGSGYYWLMTGAVCIQTAKRNIQIIPELRDLPKQTSGRARRFSRSNFRKPTRML 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2992 504 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 124 208 IPR035441 -
Bisa07g2992 504 Coils Coil 115 135 - -
Bisa07g2992 504 SMART TFS2_5 122 197 IPR003617 GO:0005634
Bisa07g2992 504 MobiDBLite consensus disorder prediction 485 504 - -
Bisa07g2992 504 Pfam TFIIS helical bundle-like domain 147 195 IPR017923 -
Bisa07g2992 504 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 5 491 IPR044805 -
Bisa07g2992 504 MobiDBLite consensus disorder prediction 333 367 - -
Bisa07g2992 504 CDD TFIIS_I 124 195 - -
Bisa07g2992 504 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 121 195 IPR035441 -
Bisa07g2992 504 ProSiteProfiles TFIIS N-terminal domain profile. 123 198 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2992 Bisa-ChrBisa07 63378622 63383774 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Bisa07g2992 Med26 2.6e-06 No_clan