Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2990 ATGAAGTCTGGGTCATTAGATTACTGGAGGAATTACTTTCGAACTGCAAATTCTGATATATTCGATATAATTGACCATGCTATCGTGGTGGCCATTTCGGATTGCCCAAAGGAGTTCAGATTGAGAAGAGATGGAATTGCAGAACGGTTGTTTTCTTGTAGAATGACTCGTTGTGTGGGGTGTGACCGAGTGGAATTGGCGGTGTCTGGTGACGAGGAGGAAGATGGAGGTTGTAAGAGTGGTTGTGATCGAGAAGGTACTGAATTGGAAGCAGGCGCTAGTAAAGAGAGCAAGGTCAATAGTAGCAGAGACGATCATGGAGGGATGAACAGGAACCCAGTAAGTAATTTTGGCTTTGGAGATGCTGAGGCATTGACTGATGAGATTGAAGAAGAGTCTCAGATGGTTAGGGAAGTTTTGAGGATCAAAGAGATTCTCCATAACAGTGAAGAAGAGTCTGATTCAGTGTTGTTTGAGTCATTGAGGAGGCTACAGCTGCTGGAACTATCCGTGGATCTTCTTAAGGGTACTGAGATTGGAAAGGCTGTCAATCCTCTTCGGAAGCATGGATCAAAGGAGATTCGTCAACTTGCGCGGACTCTTATCGATGGCTGGAAAGGAATGGTAGATGAATGGGTCAAGGCTACAGCAGCTATTGCAGGTTCAGAAGGCACCCCAGATTCAGCAAATCCATCTGTTGTTGATGAAGAGGAAGGGCTTCCATCACCTCCTATGGACGAAGGGGCTTTCTTTGCCGCTCCAACTGGTTCAATGGAACTCTCTCAGTTCTTTGATGGCATTGATGATGATGGAAATTTTCGATGTGGTGGGGAATTCACCAAGACCCGTGAACATATAAGAAAACCATCTGTGGACAGTCAAAACATAGCAAAGAGGAAGCCACAGGTTTCCAATGAGGCCAAGGAGAGTAAGAGTCATCAAGCAAAGAAGAACGAGGTTGCTGTGAGACAAAATGAACCGATTAGTGCTGATTCTGTCTCTGGCAGACCACCAAAATCGTGTGTGCTGCAAAAAAGCAGTACAGGGCCAAAGATGCAGCAAAAAGTAGATAAGAGTGCTATCCCAAAGAAGCCTCTGGTTGGTCAGCAAAATAAATTCAAGTGCTCGGATGATGCTTCAGTCCAAGTTAAGCTAGAAGCCACTAAAAGGAAACTTCAGGAGTCTTATCAACAAGCTGAAAATGCCAAGAGGCAGCGGACAATACAAGTTATGGAGTTGCATGATCTCCCCAAGCAAGGGAATGGCTTCCGGAATCCACACGCGAAACCCGGGAACAACAGCAGGCATTGGGCTCATGGACGAAGATAG 1329 0.4567 MKSGSLDYWRNYFRTANSDIFDIIDHAIVVAISDCPKEFRLRRDGIAERLFSCRMTRCVGCDRVELAVSGDEEEDGGCKSGCDREGTELEAGASKESKVNSSRDDHGGMNRNPVSNFGFGDAEALTDEIEEESQMVREVLRIKEILHNSEEESDSVLFESLRRLQLLELSVDLLKGTEIGKAVNPLRKHGSKEIRQLARTLIDGWKGMVDEWVKATAAIAGSEGTPDSANPSVVDEEEGLPSPPMDEGAFFAAPTGSMELSQFFDGIDDDGNFRCGGEFTKTREHIRKPSVDSQNIAKRKPQVSNEAKESKSHQAKKNEVAVRQNEPISADSVSGRPPKSCVLQKSSTGPKMQQKVDKSAIPKKPLVGQQNKFKCSDDASVQVKLEATKRKLQESYQQAENAKRQRTIQVMELHDLPKQGNGFRNPHAKPGNNSRHWAHGRR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2990 442 Coils Coil 382 409 - -
Bisa07g2990 442 MobiDBLite consensus disorder prediction 89 105 - -
Bisa07g2990 442 Pfam TFIIS helical bundle-like domain 161 209 IPR017923 -
Bisa07g2990 442 MobiDBLite consensus disorder prediction 302 320 - -
Bisa07g2990 442 MobiDBLite consensus disorder prediction 417 442 - -
Bisa07g2990 442 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 134 223 IPR035441 -
Bisa07g2990 442 MobiDBLite consensus disorder prediction 220 243 - -
Bisa07g2990 442 ProSiteProfiles TFIIS N-terminal domain profile. 137 212 IPR017923 -
Bisa07g2990 442 MobiDBLite consensus disorder prediction 339 354 - -
Bisa07g2990 442 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 127 220 IPR035441 -
Bisa07g2990 442 SMART TFS2_5 136 211 IPR003617 GO:0005634
Bisa07g2990 442 MobiDBLite consensus disorder prediction 284 372 - -
Bisa07g2990 442 MobiDBLite consensus disorder prediction 89 113 - -
Bisa07g2990 442 Coils Coil 122 142 - -
Bisa07g2990 442 CDD TFIIS_I 138 210 - -
Bisa07g2990 442 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 3 430 IPR044805 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2990 Bisa-ChrBisa07 63360576 63363283 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Bisa07g2990 Med26 2.1e-11 No_clan