LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa07g2979	ATGGCCGACCCACTCGCCACCGAATCACCGCCGCCTGACCTGAGTTCCCTTGATTTCGCTGCCGAGTTCGATAACCTCCCTATACCATCAATGGATTCCCTCTTCTCCAATAACAGCGACGCGCTGTCTTCTGAAGCATTCGCCTCCAATTTGGACTTAGGGTTTGAAGGCGATTTCGAGATTACCTTCGACGATCTTGACAATCTTTATATACCTTCTAATATCGACGAATTCCTTAACCACGACGCTTCTGTTGCGCCTCCCGTGCAGATCCACGATAGTTGTGGTAGTTTTGATAATTCCGAATGCTATCTGAGTTCCGATGTTCCTATGTCTTCGAATTCACAGTCTTCTCCGCCTGGTTCTTTAGATAATTCAGGGGATCAGAATTCGCATGACTCAAATGATGTCAGGGTTTCGACCTTTCAATCGCCGGACTCTGATTCTTCCGACCGGGAATCTTCGGGTAGGCCAGTTTCGTCTCAGGGTTCAGGCAACAGTGGGTCAGGTATTTGTGAAGCGATGGATTCACCTTCACCGGATTCTACCCGATACGACAGAGATTTTACATCTCATGTAATTGTTGATGAGAACATAAAATTGGAAGATACTGGGAAGAGTTGTGATTTGAAGAGGAAGATAGAAAGCAATGAAGGAAATAATGAGGCTAGAACTACTAAGCAACGGAGGTCGTCAACGCCTATTGGGAATGCAACTCAAGAGGCTGGTCTCGGTACCGTCAATGAAGAGGACGATAAAAGAAATGCTAGGTTGATGAGAAATCGTGAGAGTGCCCAGCTTTCTAGGCAGAGAAAGAAGCAATATGTGGAGGAGCTTGAGGAGAAGGTGAGATCAATGCATTCCACCATTACTGATTTGAGTAGCAAGATATCGTTTGTCATGGCCGAGAACGCTACTTTGAGACAGCAATTGAGTGCTGGCGGAATGCGCCCTGGTCCACCTCCAGGGATGCATGCCCATCCTCCGGTGCCGCCCATGCCTTATCCTTGGGTGTCGTATGCTCCCTATGTTGTCAATCCGCAAGGGTCCCAGGTTCCCTTGGTACCAATTCCGAGATTGAAGTCTCAGCAACCGGTAGCGGCCTCAAAAAGTAAAAAGTCCGAGCGTAAGAAGTCTGAGGGTAAAACTAAGAAGGTTGCTAGCATCAGTTTGCTGGGTTTGTTATTCTTTTTCTTGCTTTTTGGTGGATTGGTTCCCCTTGTGAATGTTAAGTTTGATGGTTTAGTGGACGGTGTTTCCGGGAGATCTAGGTATGTTAGCGATAGGTCCTATAGTCAGCTCGAAGGGAAAGTCTTGCCCATAAATGGTTCTAGGAATGGATATGAAGGGAGGGGAGGATTTTCTAGTGGAAGATTTGGTATTTCTGACAGAATGACTGATGGGAGAGGCCGGAAACTAGGGGAAGAAACGCATAATCAGCGAGACTCGCTGCATAAATCAGGTTCAGATGAATTTGTCCATGTTGGCAATACTAGCGAGCCTCTCGTTGCTTCTTTGTATGTTCCTAGGAATGATAAACTGGTTAAGATTGATGGGAACTTGATAATCAATTCTGTCTTGGCTAGTGAGAAAGCTATGGCATCTCAAACTTCTCATATTGCAAAGAATGGTAAAAGGGACTCTGGTTTGGCAATTTCTAAAAATTTGGATTCTGCATTGGCTATTCCTGAACAGAGGAAGGCACTTGCATTTGGTTCAGCTGAAACTCTGAAGGACCATTTCAAGTCAACTGCATCTGATGGTAAAATGCAACAGTGGTTCCGTGAAGGCCATGCAGGCCCTATGTTGAGTTCTGGCATGTGCACTGAAGTTTTCCAATTTGATGTCTCACCAGCTCCAGGAGCTATTGTACCAGCATCATCAATAGCCAATGTTTCTGCAGGTAACCACCGGAATGGTACTAGTCTCAACAAGGGTAGTAGGAATAGAAGAATCCTCAATGGGTTCCCACTTGCTGGATCCAGTTTTAACGCAAGTGAAGAACAAAGAGGACGAAATTCCCTGAACGACTCTTCCATGGTAGTATCTGTGCTTGTAGATCCCAAAGAGGCTGGAGATGTTGATGTTGATGGTGTGATAACACCAAAGTCTCTTTCTCGAATATTCGTGGTTGTGCTTGTGGACAAAATCAAGTATGTCACATATTCGTGTAATCTTCCTCGCGCTTCTCCCCATCTGGTGACTGCTTAA	2211	0.4564	MADPLATESPPPDLSSLDFAAEFDNLPIPSMDSLFSNNSDALSSEAFASNLDLGFEGDFEITFDDLDNLYIPSNIDEFLNHDASVAPPVQIHDSCGSFDNSECYLSSDVPMSSNSQSSPPGSLDNSGDQNSHDSNDVRVSTFQSPDSDSSDRESSGRPVSSQGSGNSGSGICEAMDSPSPDSTRYDRDFTSHVIVDENIKLEDTGKSCDLKRKIESNEGNNEARTTKQRRSSTPIGNATQEAGLGTVNEEDDKRNARLMRNRESAQLSRQRKKQYVEELEEKVRSMHSTITDLSSKISFVMAENATLRQQLSAGGMRPGPPPGMHAHPPVPPMPYPWVSYAPYVVNPQGSQVPLVPIPRLKSQQPVAASKSKKSERKKSEGKTKKVASISLLGLLFFFLLFGGLVPLVNVKFDGLVDGVSGRSRYVSDRSYSQLEGKVLPINGSRNGYEGRGGFSSGRFGISDRMTDGRGRKLGEETHNQRDSLHKSGSDEFVHVGNTSEPLVASLYVPRNDKLVKIDGNLIINSVLASEKAMASQTSHIAKNGKRDSGLAISKNLDSALAIPEQRKALAFGSAETLKDHFKSTASDGKMQQWFREGHAGPMLSSGMCTEVFQFDVSPAPGAIVPASSIANVSAGNHRNGTSLNKGSRNRRILNGFPLAGSSFNASEEQRGRNSLNDSSMVVSVLVDPKEAGDVDVDGVITPKSLSRIFVVVLVDKIKYVTYSCNLPRASPHLVTA	736

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa07g2979	736	MobiDBLite	consensus disorder prediction	363	382	-	-
	Bisa07g2979	736	Pfam	bZIP transcription factor	249	311	IPR004827	GO:0003700\|GO:0006355
	Bisa07g2979	736	PANTHER	BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED	54	733	-	-
	Bisa07g2979	736	MobiDBLite	consensus disorder prediction	106	186	-	-
	Bisa07g2979	736	MobiDBLite	consensus disorder prediction	211	253	-	-
	Bisa07g2979	736	FunFam	bZIP transcription factor 49	252	314	-	-
	Bisa07g2979	736	SUPERFAMILY	Leucine zipper domain	253	311	IPR046347	GO:0003700\|GO:0006355
	Bisa07g2979	736	Coils	Coil	262	296	-	-
	Bisa07g2979	736	Gene3D	-	252	315	-	-
	Bisa07g2979	736	CDD	bZIP_HY5-like	254	305	-	-
	Bisa07g2979	736	SMART	brlzneu	249	313	IPR004827	GO:0003700\|GO:0006355
	Bisa07g2979	736	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	251	314	IPR004827	GO:0003700\|GO:0006355
	Bisa07g2979	736	MobiDBLite	consensus disorder prediction	226	244	-	-
	Bisa07g2979	736	MobiDBLite	consensus disorder prediction	211	225	-	-
	Bisa07g2979	736	MobiDBLite	consensus disorder prediction	106	173	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa07g2979	Bisa-ChrBisa07	63233174	63236813	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa07g2979	1	736	bZIP Transcription Factor Family	AT2G40950	47.389	2.32e-162	484

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Bisa07g2979		bZIP_1	9.2e-13	CL0018