Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2974 ATGGCATTATCTCCCCTGATTTCGTCTCTCCGAAAAGAACTCAAAATTGAAGAGTCAGAATTCCCCGAGTCACATATCGGAAACGAAGGCCTCATAAAACGCATCCTCAGAAAAGGACTCAACTGGCAAACTCCATCTCTTGGAGACCAAGTGGAAGTTCATTTCAGAGGACATGTTGATAATGGAGCATCCCTTGAATCTAGTTATGATAAAGGAACCCCATTTCGATTCAACTTAGGCCAAAGTGAAGTTATAAAAGGTTGGGATGAAGGAGTTGCTACCATGAAAAAAGGGGAGAGAGCAATCTTTAAAATACCACCCAACTTGGCGTACGGGGAGAAGGGTTCTCCACCTCTGGCTCCTCCAAATGCAACTCTCATTTTTGAGATTGAGATGCTATCTTGGATTACCATCAGGGACTTGACTGGCGATGGAGGAATCATGAAGAAGATAATGAAGGAGGGAGAGGGATGGGCAACTCCCAGAGACGCCGACCAGGTTTTAGTGAAATATGAAGCAAGGGAAGAGAGCGGAATGCTTGTTTCTGAATCTAAACAAGGGGTAGAGTTTAATATAAATGATGGCTATCTTTGTCCCGCCATGAGCATAGCACTGAAAACAATGAGAAAGGGTGAGGAAGCAGAGCTCACTTTCAGATTCTTATATGGTCAGATACAAAATTCAAACAGAACCGGTGAAAAGAATGGTTGTGCCCCGCCAGATACTATTTTAACTAGTGCCAAACTTGAGCTGGTGTCATGGAAAAGTGTAATTGATGTCACAGGAGACAAGAAGATACTTAAAAAGATTGAGAAATCTGGAGAGGGGTTTGAGCGTCCCAATGAAGGATCACAGGTGAAAGTAATATATGAGAGTAAACTTAAAGATGGAACAATTATTGAGAGGAGAGGATCGGAGGAAGAACCTTTTGAGTTCACAACTCAGGAAGAACAAGTACCTGAGGAGTTAGAAAGAGCAATCATGACAATGAAAAAAGGAGAGCAAGCCATAGTGACAGTCAGTGCCGAATATTTGTCTGATGTAGATAATTTACAGACAACCGCAGCTAATAAAGTCCTTTATTATGAGGTCGAATTGGTTGATTTCATTAAGGAGAAGCCATTTTGGAAAATGGACACTCAGGAGAAAATAGAAGCTTGTGAGAAGCAGAAGCATGATGGAAATTTACTGTTCAAGGCTGAAAAGTATAGGCGTGCCTCGGAAAAATATGAGAAGGCTATAAAATGCATTGAGTTTGATCATTCATTCAGTGATGACGAGAAGCGTCATGTTAGTGCCTTAAGGTTATCTTGTCATTTGAACAATGCTGCTTGTAAACTTAAATTGGGGGAATACAATGAAGCCTCCAGACTATCTACTAAGGTCCTAGAACAAGATCCATTAAATGTGAAGGCTCTGTACAGAAGATGCCAAGCATACCTGAAAACATCAGACTTAGAGAAAGCTGAGGCTGACATTAAAAAAGCTCTGACAATTGATCCAAACAACAGGGACATGAGATCTGAGTACAAGGAGCTGAAACTTAAACAAAAGGAATACAGTAGATACGAAGCTGACATCTTCAGCACTATGCTTTCAAGGATGGGCTAG 1611 0.4122 MALSPLISSLRKELKIEESEFPESHIGNEGLIKRILRKGLNWQTPSLGDQVEVHFRGHVDNGASLESSYDKGTPFRFNLGQSEVIKGWDEGVATMKKGERAIFKIPPNLAYGEKGSPPLAPPNATLIFEIEMLSWITIRDLTGDGGIMKKIMKEGEGWATPRDADQVLVKYEAREESGMLVSESKQGVEFNINDGYLCPAMSIALKTMRKGEEAELTFRFLYGQIQNSNRTGEKNGCAPPDTILTSAKLELVSWKSVIDVTGDKKILKKIEKSGEGFERPNEGSQVKVIYESKLKDGTIIERRGSEEEPFEFTTQEEQVPEELERAIMTMKKGEQAIVTVSAEYLSDVDNLQTTAANKVLYYEVELVDFIKEKPFWKMDTQEKIEACEKQKHDGNLLFKAEKYRRASEKYEKAIKCIEFDHSFSDDEKRHVSALRLSCHLNNAACKLKLGEYNEASRLSTKVLEQDPLNVKALYRRCQAYLKTSDLEKAEADIKKALTIDPNNRDMRSEYKELKLKQKEYSRYEADIFSTMLSRMG 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2974 536 Gene3D - 256 372 IPR046357 GO:0003755
Bisa07g2974 536 SMART tpr_5 470 503 IPR019734 GO:0005515
Bisa07g2974 536 SMART tpr_5 387 420 IPR019734 GO:0005515
Bisa07g2974 536 SMART tpr_5 436 469 IPR019734 GO:0005515
Bisa07g2974 536 Gene3D - 24 138 IPR046357 GO:0003755
Bisa07g2974 536 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 164 244 IPR001179 GO:0003755
Bisa07g2974 536 SUPERFAMILY TPR-like 377 531 IPR011990 GO:0005515
Bisa07g2974 536 Gene3D Tetratricopeptide repeat domain 373 530 IPR011990 GO:0005515
Bisa07g2974 536 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 279 367 IPR001179 GO:0003755
Bisa07g2974 536 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 160 231 IPR001179 GO:0003755
Bisa07g2974 536 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 44 133 IPR001179 GO:0003755
Bisa07g2974 536 ProSiteProfiles TPR repeat profile. 470 503 IPR019734 GO:0005515
Bisa07g2974 536 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 283 370 IPR001179 GO:0003755
Bisa07g2974 536 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 48 136 IPR001179 GO:0003755
Bisa07g2974 536 SUPERFAMILY FKBP-like 18 137 - -
Bisa07g2974 536 Gene3D - 139 255 IPR046357 GO:0003755
Bisa07g2974 536 FunFam Peptidylprolyl isomerase 375 530 - -
Bisa07g2974 536 FunFam Peptidyl-prolyl cis-trans isomerase 24 136 - -
Bisa07g2974 536 PANTHER PEPTIDYLPROLYL ISOMERASE 23 134 - -
Bisa07g2974 536 Pfam Tetratricopeptide repeat 470 503 IPR001440 GO:0005515
Bisa07g2974 536 SUPERFAMILY FKBP-like 260 389 - -
Bisa07g2974 536 SUPERFAMILY FKBP-like 141 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2974 Bisa-ChrBisa07 63156800 63160136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2974 23 535 Calmodulin-binding Proteins AT5G48570 53.269 0.0 555