Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2921 ATGGGTAGCAGAAAGGAAGATGAGAGAAACGAGAAGATCATTAGAGGACTTATGAAGCTTCCGCCAAACCGAAGATGTATCAATTGCAATAGTTTGGGTCCGCAATATGTTTGTACGAATTTTTGGACCTTCATTTGCATGACATGCAGTGGGATACATCGTGAGTTTACTCATCGTGTGAAGTCTGTATCAATGGCGAAGTTCACTTCTCAAGAAGTAGAAGCTCTTCAAAATGGTGGCAACCAGCGGGCAAGAGACATATATTTGAAAGATTGGGACTTCCAAAGGCAGCGATTGCCAGATAGCAGCAATGTTGACAAAATAAGGGAGTTTATAAGGAATGTATACATCAATAGAAAATATGCTGGAGCAAAGTCCTCCGACAAGCCTCCAAGAGATTTGCAGAGCCCTAGAATCCATGGAGATGAGACAAGGCGCGCCAGTTCTTATCATTCTTATTCTCAAAGTCCTCCATATGATTATCAATATGAAGATCGGCGGTATGGAAAACAAGCAGCTGTATTGACCAGGAAGCCTGGTTCAGATAAAGGCCGCTATGAAGGGAAGATGACTAGTGTTATTTATAGTCCTGGTCGCTTCAGTGATCATGCATCTGAGGACAGGTTTGCAAATGAGGGACCTGGTCCACGAATTTCGGACTATTCTTTGTCTAGTGGAGGTGAACAATTCAAATCCGGTGTGCAGTCTCCAAAGTTCCATCAAGACATTGGATTTAGCAGTCCATCCCATCAGCGTTCTAGTACTGGTTCAAGTGAAGAAGTATGGGCTCAACCAAAGTTTATCTCTCTGGAAACAATTGCAAAGGGAGAGGCAGACAGACATCATCCACAGAGAACTACGTCATTGGGATCAACAGACAGCAACCAAATATACTTCAAATCTTACAGTTCTGGTGGTTTAGTTGATTTATTTTCAGAACCTGTCCAAGGTTCTGGATCCCACGAGAATAAAGTGTCTCCCATACCGTCTCCCATACCACAACATTCTCACCCCACAAGATCTGTTAGCTTGGATCTTTCAAAGGCACCAGCAGCATCCCAGCCATTAACTTCCTCAATGCCACCTATCGATCTCTTTGAGTCGCCGGCATTCTCTCAGGCTTCATCAGTGGATTTGTTTCAACCATCTGTTTTGTCTTCTGCTCCATCTATGAATGAAAGTCATCCTTCACAAATATCTCAGCCCTCATCTACTGACTTCTTTGTGGATGCTTCTCAGCAGCAGTTGGCTGCTACCTCAGATGAGAAGTCCCCAGAGCTATTTGTGCCTAAAAATGAAGGATGGGCAACATTCGATGTGCCTCAGCAAGCAGCATCTATGACACAAGTTGAAATTCCAGCAGGAGTACCTTCAACTGATAAGTCTTTGCTGGAAGTATTTGATCCATTTTCAACTGGAAGTGCCAGCACAGAATTGGCATCTTTCGAAAATTCCAGTGTTCACGAACCTTCTGTTACATCTAATCCATGGCATGGTGCTGTGCAGAATGGAGAACATGTTTCTGTTACTGCAGCAAATTCTCAACCATGGAATGCATTTGAAGATTCTGGTTCACACCTTCCTGTAGATGCTACTACTCAAGGATTGCAACTGCACCATATTCCATCAAGCGATGATCAATTCCTTGGTTTAAGTGTTTCTGAGGGCTCCAGTAAAGGTGGGATGCAAGGCTTTGCTCCTGTTGGTGCACCTAATGATCATAATATTCCATCACATGTTAATGGTTCATCATATCCTCCATCGGTGCTTCCCTTGATGGTTTATTCTCAGGGTGAGTCTCAACACAAGGCAACAAACCAGAAATCAACTAATCCCTTTGATCTTCCCTTTGAATCTGATGTAGAGCACAACAATATGTTCCTTGATATGAGCTCTTTGCAAGCTGCTCTGCCAGATGCCCAGTTGGCACCCCCATTCCATGGCAGTATTGCTGAACCATGGCTCCCTCAAAGTATCGCCCCTTATATTCCATCTGCAGGACAAGGTGGTTTAACATTCATGGCTGCTCAACCACCAAGTTCTCAGATACCGAACGTCCAGGCGCAGGGACCAGTTGCTTCTTTCGGGGGAAATCCATTTGCATAG 2106 0.4411 MGSRKEDERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTNFWTFICMTCSGIHREFTHRVKSVSMAKFTSQEVEALQNGGNQRARDIYLKDWDFQRQRLPDSSNVDKIREFIRNVYINRKYAGAKSSDKPPRDLQSPRIHGDETRRASSYHSYSQSPPYDYQYEDRRYGKQAAVLTRKPGSDKGRYEGKMTSVIYSPGRFSDHASEDRFANEGPGPRISDYSLSSGGEQFKSGVQSPKFHQDIGFSSPSHQRSSTGSSEEVWAQPKFISLETIAKGEADRHHPQRTTSLGSTDSNQIYFKSYSSGGLVDLFSEPVQGSGSHENKVSPIPSPIPQHSHPTRSVSLDLSKAPAASQPLTSSMPPIDLFESPAFSQASSVDLFQPSVLSSAPSMNESHPSQISQPSSTDFFVDASQQQLAATSDEKSPELFVPKNEGWATFDVPQQAASMTQVEIPAGVPSTDKSLLEVFDPFSTGSASTELASFENSSVHEPSVTSNPWHGAVQNGEHVSVTAANSQPWNAFEDSGSHLPVDATTQGLQLHHIPSSDDQFLGLSVSEGSSKGGMQGFAPVGAPNDHNIPSHVNGSSYPPSVLPLMVYSQGESQHKATNQKSTNPFDLPFESDVEHNNMFLDMSSLQAALPDAQLAPPFHGSIAEPWLPQSIAPYIPSAGQGGLTFMAAQPPSSQIPNVQAQGPVASFGGNPFA 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2921 701 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
Bisa07g2921 701 MobiDBLite consensus disorder prediction 123 162 - -
Bisa07g2921 701 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 134 - -
Bisa07g2921 701 MobiDBLite consensus disorder prediction 682 701 - -
Bisa07g2921 701 MobiDBLite consensus disorder prediction 197 216 - -
Bisa07g2921 701 SUPERFAMILY ArfGap/RecO-like zinc finger 9 122 IPR037278 -
Bisa07g2921 701 SMART arf_gap_3 11 129 IPR001164 GO:0005096
Bisa07g2921 701 MobiDBLite consensus disorder prediction 228 261 - -
Bisa07g2921 701 CDD ArfGap_AGFG 11 121 - -
Bisa07g2921 701 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Bisa07g2921 701 MobiDBLite consensus disorder prediction 125 147 - -
Bisa07g2921 701 Pfam Putative GTPase activating protein for Arf 12 123 IPR001164 GO:0005096
Bisa07g2921 701 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Bisa07g2921 701 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Bisa07g2921 701 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Bisa07g2921 701 MobiDBLite consensus disorder prediction 316 358 - -
Bisa07g2921 701 MobiDBLite consensus disorder prediction 313 358 - -
Bisa07g2921 701 PANTHER ARFGAP/RECO-RELATED 1 701 IPR044820 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2921 Bisa-ChrBisa07 62373015 62379656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2921 14 116 C2H2 Transcription Factor Family AT4G05330 34.211 6.96e-12 65.5