Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2913 ATGAGTTCACAACTCTTCAACAACGGTTCTGATGGTTTTAGCGGGGATATGAATCTTCTCCCTTCATCCCCTAATCATACCTCTCCTCGACTCCAGCCTCTTGTGTCAAACACTTTTGGGGTCTTGGGTCAGAGTGATGGTGAGACAGGCTTTCAGACCCTGAGCCCTTCTTTTCTGGGACAAGAGAGCCGGGAAACAAAGAGAAGCAATAATGAAGGTGATGGGCATTTCGGGGGTGAAAACAAAAGCTTGGCTTTCAAACTCGGTGAGGAGGACGTAGAACCTAAGAGATCTGCTGGTGAGAGCAATGTCCACACCAAGCTCTGCGCTAGAGGCCACTGGAGGCCAGCTGAAGATTCCAAACTCAAAGAGCTCGTAGCTCAGCACGGTCCTCAAAACTGGAACCTCATCGCCGATCATCTCGAAGGAAGATCAGGCAAGAGTTGCCGATTGAGGTGGTTCAATCAACTAGATCCTAGAATCAACAGGAGGACATTCACCGAGGAAGAAGAGGAGAGGCTGTTAGCTACTCATAAAATGTACGGTAACAAATGGGCCATGATTGCTAAATTGTTTCCGGGTAGGACGGATAACGCAGTGAAGAACCACTGGCATGTGATCATGGCCAGGAAGCAGAGAGAGCAGTCAAATTCGTGTAGGAAGAGAAGACTCACTTCTGAAATCCTTCCAAAGGCTCTAAATTTGGGTCTCTCAAATAATGCAGCCAGTGAATCCACCATCTCCAGCACCATCATAGATGAATCTGCCTCAACAACCACTAATCTCTCCCTCACTCCTACGATTTTCCCCAATTTGGGTCACCAGGGCCATGGATCGCCAATGGGACTGTCATTTGAAAGGAGGTTGAGAACTGCGGATGTGGGGTTTGACAAGTTCTTTGGGGGCTGGAAGGGATCGTGTGAGGGAGGATCCATGGGGAGGCGTATGGGTGTGGTGGACCAGTCGAATTATTCAGATTCAAACTCAGAAATCTCAGTATCTGAGTCAGTTGGCACCAACAGGAGCAACCTCTCAATTTCTGGGGAAAGTGAGAAGGTGGGCGATAACATAAACATGCCATTCATTGATTTCCTTGGAGTAGGCGCTTTGCAGCGAAATGGGGTGTGTAGGAGTAGGTCCTATGTGCACTCCATTGTGTACATTTTCCCCGTTCCCGACGGCGAGGAGTTAATTGTCAGTGCTCAATTTTCGAAGGACATCTGA 1224 0.4845 MSSQLFNNGSDGFSGDMNLLPSSPNHTSPRLQPLVSNTFGVLGQSDGETGFQTLSPSFLGQESRETKRSNNEGDGHFGGENKSLAFKLGEEDVEPKRSAGESNVHTKLCARGHWRPAEDSKLKELVAQHGPQNWNLIADHLEGRSGKSCRLRWFNQLDPRINRRTFTEEEEERLLATHKMYGNKWAMIAKLFPGRTDNAVKNHWHVIMARKQREQSNSCRKRRLTSEILPKALNLGLSNNAASESTISSTIIDESASTTTNLSLTPTIFPNLGHQGHGSPMGLSFERRLRTADVGFDKFFGGWKGSCEGGSMGRRMGVVDQSNYSDSNSEISVSESVGTNRSNLSISGESEKVGDNINMPFIDFLGVGALQRNGVCRSRSYVHSIVYIFPVPDGEELIVSAQFSKDI 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2913 407 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 157 IPR017930 -
Bisa07g2913 407 CDD SANT 174 205 IPR001005 -
Bisa07g2913 407 PANTHER MYB PROTEIN-RELATED 111 241 - -
Bisa07g2913 407 Pfam Myb-like DNA-binding domain 111 157 IPR001005 -
Bisa07g2913 407 Pfam Myb-like DNA-binding domain 163 206 IPR001005 -
Bisa07g2913 407 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 158 212 IPR017930 -
Bisa07g2913 407 MobiDBLite consensus disorder prediction 46 82 - -
Bisa07g2913 407 Gene3D - 111 162 - -
Bisa07g2913 407 MobiDBLite consensus disorder prediction 46 64 - -
Bisa07g2913 407 MobiDBLite consensus disorder prediction 1 33 - -
Bisa07g2913 407 Gene3D - 165 228 - -
Bisa07g2913 407 ProSiteProfiles Myb-like domain profile. 111 157 IPR001005 -
Bisa07g2913 407 SUPERFAMILY Homeodomain-like 111 204 IPR009057 -
Bisa07g2913 407 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Bisa07g2913 407 SMART sant 162 210 IPR001005 -
Bisa07g2913 407 SMART sant 110 159 IPR001005 -
Bisa07g2913 407 CDD SANT 114 155 IPR001005 -
Bisa07g2913 407 FunFam MYB transcription factor 111 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2913 Bisa-ChrBisa07 62214809 62217303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2913 89 370 MYB Transcription Factor Family AT1G69560 44.326 4.78e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa07g2913 Myb_DNA-bind_6 3.7e-15 CL0123