Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2911 ATGAGCGCAGGAGTCATGTCTCAGAAGGATCCGGCTATCAAGCTATTTGGCAGGAAGATTCCCTTGCCGGCATGTCAGATTACGGTGACCTCTCCGGCGGGTCTTCAGATTCCGGCCAACTCCGGAGCCATGGATGTTTGCAGCAGCGTAGAGAAAACAGAAGTGGAAAGACTTTTTGCAGGAAACTATGAGCAACCAGAGAATTCCTCTAATTTGGCAGCTAGTAAAAATGTTTCCCAACATAATCAGCAAGAAAATGAGCGAAAAGTCAATCCAACACCTGTGGAAGATAAGATGGAAACTGGTAGTGCAGATCAAGATAAAACATTTAAGAAGCCAGACAAGATTCTTCAGTGTCCTAGATGCAACAGTTTGGAAACAAAGTTTTGTTATTTCAATAACTACAATGTCAACCAACCTCGACATTTCTGCAAGAACTGCCAAAGGTACTGGACGGCCGGTGGAACAATGAGAAACGTTCCGGTGGGTGCTGGGAGACGGAAGAACAAGCACCTAGCCTCTCAGTTTCGCCACATTATAGTAGATTCGGATGGAATTCCAACCACCAGGTTAGAAACCACAGACTCATCATGTAGTCACCAAATTATCTCAGCTCCTGAATCCTCAGCTGCTTTCAGGTCTTCAATGGCAATGGATAATGGTATTGTATTGAAATTTGGTCCAGATGCCCCTCCTCTCTGTGAATCCATGGAGACAACGCTAAGCCTTAGAGACCATAAAAGAAGTGGTGATGCAGAAAATGGGAAGGAGAAGGAGCCATCCCTATGTAGATCTTCAGTAACAAATGCTAGTGGTGCAGAATTTGTGATGCAAAAGGAGCCATGTGGTCCTAATGAGCTTAATACACCCAATCATTTGCAATGTTACCCTGTTCCTCCATGGGTGTTTCCTTGGAATCCAGATTGGAACAATGCTGTTTCCATGGCAGGTGTTCATCAATCTTCGAATCCAATGCAGTGGTATCCTACAACATTGGTGGCAGTTCCTGGCTTGTGTCCACCAAATACTCCTTTACAATATGCAACACCATCATACTGGGGTGGCAGTGGCACCCCTGTATGGGCTGCTGGAGCCGGGACAATCTCAATAGGATCCAATGGTTGCCTTTCGCCTTCATCTTCTACCAGTAATAGCTGCTGCTCAGGCAATGGCTCCCCAACCCTGGGAAAACACTCCAGAGATACAGTGTTCACAGAGGAAGAGAAAGCAGAGAAGTGTGTTTTGATTCCAAAGACAATTAGGATTGATGACCCAAAAGAGGCATCAAAAAGTCCTATATGGGTTACATTAGGTATCAAGCCTGACAAGAGACAGTCTGAATCACAAGGTCGTAATTCAAAGAAATTGGAAGCTGAAGGAGGAAGCAAAGATTGCATGTTGGGTGTTTCTCATATCTTGGAAGCCAACCCAGCAGCTATATCTCGTGCTCATGCATTCCAGGAGAGCATATGA 1473 0.4515 MSAGVMSQKDPAIKLFGRKIPLPACQITVTSPAGLQIPANSGAMDVCSSVEKTEVERLFAGNYEQPENSSNLAASKNVSQHNQQENERKVNPTPVEDKMETGSADQDKTFKKPDKILQCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHLASQFRHIIVDSDGIPTTRLETTDSSCSHQIISAPESSAAFRSSMAMDNGIVLKFGPDAPPLCESMETTLSLRDHKRSGDAENGKEKEPSLCRSSVTNASGAEFVMQKEPCGPNELNTPNHLQCYPVPPWVFPWNPDWNNAVSMAGVHQSSNPMQWYPTTLVAVPGLCPPNTPLQYATPSYWGGSGTPVWAAGAGTISIGSNGCLSPSSSTSNSCCSGNGSPTLGKHSRDTVFTEEEKAEKCVLIPKTIRIDDPKEASKSPIWVTLGIKPDKRQSESQGRNSKKLEAEGGSKDCMLGVSHILEANPAAISRAHAFQESI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2911 490 MobiDBLite consensus disorder prediction 66 89 - -
Bisa07g2911 490 MobiDBLite consensus disorder prediction 241 264 - -
Bisa07g2911 490 MobiDBLite consensus disorder prediction 66 109 - -
Bisa07g2911 490 PANTHER CYCLIC DOF FACTOR 2 8 489 IPR045174 GO:0003700|GO:0006355
Bisa07g2911 490 MobiDBLite consensus disorder prediction 441 460 - -
Bisa07g2911 490 ProSitePatterns Zinc finger Dof-type signature. 119 155 IPR003851 GO:0003677|GO:0006355
Bisa07g2911 490 MobiDBLite consensus disorder prediction 444 460 - -
Bisa07g2911 490 MobiDBLite consensus disorder prediction 241 260 - -
Bisa07g2911 490 ProSiteProfiles Zinc finger Dof-type profile. 117 171 IPR003851 GO:0003677|GO:0006355
Bisa07g2911 490 MobiDBLite consensus disorder prediction 90 109 - -
Bisa07g2911 490 Pfam Dof domain, zinc finger 114 171 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2911 Bisa-ChrBisa07 62172462 62175079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2911 10 489 C2C2-Dof Transcription Factor Family AT5G39660 35.283 7.29e-68 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa07g2911 zf-Dof 4.1e-32 No_clan