Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2907 ATGGACAGGACGAATTTGGTTTGGGAATGCCGAATGGGAAGGGATTTGGGAAATCAGAAATGGGAAGGAAAGTCAGAAGGGATTTCAACGCTTGCACGGTATCGCAATTGGGGTTTTCACGTTCCGTTGCGGCAGGGTTTCCGTAGATTCCCATTGTCAGTATCAACAATGGCGGAACGTGGTGGCGGAGACCGTGGTGGTTTTGGCCGTGGTTTTGGTGGCCGTGGTGGACGCGGTGACCGTGGCCGTGGCCGCCGCAGGGGCCCTGGTCGCCGCGAAGAGGAGGAGAAGTGGGTTCCTGTAACCAAGCTTGGCCGTCTTGTCAAAGAGGGGAGGATCCGCAGCCTTGAGCAGATCTACCTCCACTCTCTTCCAATCAAGGAGCACCAGATCGTCGATACCTTGGTTGGTCCCAGCCTCAAGGATGAGGTTATGAAGATCATGCCGGTACAGAAGCAGACCCGGGCCGGTCAGAGGACCAGGTTCAAGGCCTTCGTTGTCGTCGGTGACGGCAACGGGCATGTGGGACTCGGTGTGAAGTGTAGCAAGGAGGTGGCTACGGCCATTCGTGGTGCTATCATATTAGCCAAGCTTTCGGTGATTCCTGTGAGAAGAGGTTACTGGGGTAACAAGATCGGGAAGCCCCATACAGTTCCGTGCAAGGTTACCGGAAAGTGTGGTTCAGTCACAGTGCGGATGGTTCCTGCCCCTCGAGGTGCCGGAATCGTTGCTGCTAGGGTGCCGAAGAAGGTCTTACAATTTGCAGGAATTGAAGATGTCTTCACTTCTTCCCGAGGGTCGACTAAGACACTTGGGAACTTCGTTAAGGCAACATTTGATTGTTTGCTGAAAACCTATGGATTCCTCACCCCTGAATTCTGGAGGGAGACCCGCTTCGCCAAATCTCCATTCCAAGAATACACAGATCTATTGTCAAAGCCAACTGGAAAGGCTCTAATCCTGGAGGAGGACAGAGTAGATGCTTGA 987 0.535 MDRTNLVWECRMGRDLGNQKWEGKSEGISTLARYRNWGFHVPLRQGFRRFPLSVSTMAERGGGDRGGFGRGFGGRGGRGDRGRGRRRGPGRREEEEKWVPVTKLGRLVKEGRIRSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFAKSPFQEYTDLLSKPTGKALILEEDRVDA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2907 328 FunFam 40S ribosomal protein S2 97 202 - -
Bisa07g2907 328 Pfam Ribosomal protein S5, C-terminal domain 224 296 IPR005324 GO:0003735|GO:0005840|GO:0006412
Bisa07g2907 328 Pfam Ribosomal protein S5, N-terminal domain 140 204 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bisa07g2907 328 Gene3D - 97 202 - -
Bisa07g2907 328 SUPERFAMILY dsRNA-binding domain-like 136 205 - -
Bisa07g2907 328 Gene3D - 203 295 IPR014721 -
Bisa07g2907 328 SUPERFAMILY Ribosomal protein S5 domain 2-like 216 296 IPR020568 -
Bisa07g2907 328 ProSitePatterns Ribosomal protein S5 signature. 157 189 IPR018192 -
Bisa07g2907 328 PANTHER RIBOSOMAL S SUBUNIT 93 286 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bisa07g2907 328 MobiDBLite consensus disorder prediction 61 95 - -
Bisa07g2907 328 NCBIfam 30S ribosomal protein S5 93 300 IPR005711 GO:0003735|GO:0006412|GO:0015935
Bisa07g2907 328 FunFam 40S ribosomal protein S2 203 296 - -
Bisa07g2907 328 ProSiteProfiles S5 double stranded RNA-binding domain profile. 140 203 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2907 Bisa-ChrBisa07 62103082 62105456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2907 94 316 Cytoplasmic Ribosomal Protein Gene Family AT3G57490 89.686 3.36e-149 419