Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2866 ATGACCATGTGGCAGGAAACCGTGGCTTGTCCGCCTGACATGGTGCTTCCACTTACAATTACCAAGGATTACAGTTTGGCCAAATATGTTGTTTTGAATATCATCTTGCAGGAATCGTTTGACATCCCTCGTGGGAATGGAGGAGACATCGAGTTAGGAGATTATGCGATGAACTCAGGAGAACTGGGTTTGGATGATTTCTTCAAGAAGGTTCAAGAACTTGATAGACATTTTGATAAGCTGAATAAGCTTTTGAGAAGGCTCCAGGAAGCCCATGAGGAAACCAAAGCTGTGACCAAAGCTTCTGCCATGAAAGAAATTAAACGGAGAATGGAGAAAGATGCTGATGAAGTTAATAAAAGTGCCCATCACATAAAACAAAGAATTGAAGAATTGGACAGAGATAATTTGGCAAATAGGCAGAAGCGTGGGTGCGGAAAAGGATCAGGTATTGACAGGTCAAGAACTGCAACCACCATTGCCTTAAAAAAGAAATTGAAGGACAAGATGGCTGAATTTCAGAGCTTACGGGAAGCCATACAACAAGACTACCGTGAGGTTGTAGAGAGACGCGTTTTTACAGTGACGGGCACAAAAGCCGATGATGAGACAATTGACAGATTAATTGAGACTGGAGATAGTGAACAAATTTTCCAGAAAGCAATTAAGGACCAAGGACGAGGACAGATACTGGACACCGTTGCAGAAATCCAAGAACGTCACGATGCAGTTAAAGATGTTGAGAAGAAGCTTCTTGACTTGCAGCAGATATATCTGGATTTGGCGGTGTTAGTTGACGCACAGGGGGACATTCTTGACAACATAGAATCCCAGGTGTCAAGTGCCGTAGATCACGTGCAACAAGGCAATAATGCCCTTTCCAAGGCTAAGAGTCTACAGAAGAGTTCAAGAAAATGGACGTGCATTGCAATTATAATTCTTCTTATCGTTGTCGTCTTCATCCTTCTTTCTGTCTTTAAACCATGGAGTAACAAAAATGGGGCGTAA 1008 0.4246 MTMWQETVACPPDMVLPLTITKDYSLAKYVVLNIILQESFDIPRGNGGDIELGDYAMNSGELGLDDFFKKVQELDRHFDKLNKLLRRLQEAHEETKAVTKASAMKEIKRRMEKDADEVNKSAHHIKQRIEELDRDNLANRQKRGCGKGSGIDRSRTATTIALKKKLKDKMAEFQSLREAIQQDYREVVERRVFTVTGTKADDETIDRLIETGDSEQIFQKAIKDQGRGQILDTVAEIQERHDAVKDVEKKLLDLQQIYLDLAVLVDAQGDILDNIESQVSSAVDHVQQGNNALSKAKSLQKSSRKWTCIAIIILLIVVVFILLSVFKPWSNKNGA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2866 335 Gene3D - 61 188 - -
Bisa07g2866 335 CDD SynN 64 221 IPR006011 GO:0016020
Bisa07g2866 335 Pfam SNARE domain 271 322 IPR000727 -
Bisa07g2866 335 SMART SynN_4 59 185 IPR006011 GO:0016020
Bisa07g2866 335 Gene3D - 229 327 - -
Bisa07g2866 335 Pfam Syntaxin 66 269 IPR006011 GO:0016020
Bisa07g2866 335 Coils Coil 163 183 - -
Bisa07g2866 335 SUPERFAMILY t-snare proteins 63 289 IPR010989 GO:0016020|GO:0016192
Bisa07g2866 335 CDD SNARE_syntaxin1-like 233 295 - -
Bisa07g2866 335 SMART tSNARE_6 229 296 IPR000727 -
Bisa07g2866 335 Coils Coil 115 135 - -
Bisa07g2866 335 PANTHER SYNTAXIN 67 315 IPR045242 -
Bisa07g2866 335 FunFam Syntaxin 132 227 327 - -
Bisa07g2866 335 Coils Coil 71 101 - -
Bisa07g2866 335 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 234 296 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2866 Bisa-ChrBisa07 61496719 61502062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2866 32 335 SNARE and Associated Proteins AT3G03800 68.954 9.39e-147 414